Sphingorhabdus sp. M41: AZE99_00095
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Entry
AZE99_00095 CDS
T04317
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg03030
DNA replication
sphg03430
Mismatch repair
sphg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZE99_00095
03430 Mismatch repair
AZE99_00095
03440 Homologous recombination
AZE99_00095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphg03032
]
AZE99_00095
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_00095
Enzymes [BR:
sphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZE99_00095
DNA replication proteins [BR:
sphg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AZE99_00095
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AZE99_00095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
YppF
Motif
Other DBs
NCBI-ProteinID:
AMO70456
LinkDB
All DBs
Position
13819..14517
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AA seq
232 aa
AA seq
DB search
MREIIFDTETTGFDPQNGDRMVEIGCIEMIDRIETGQSFHCYYNPQRTMPKAAENVHGLS
DVFLSDKKLFADGAAELLDFLGDAKLVAHNAQFDFNFLNAELLLCGYREISRFRMIDTLA
IAKSKHPGAKLSLDALCSRYGIDRSHRVKHGALLDAELLSQLYIELTGGRQIGLGLAEDT
KRQDAIASMRPTSRPAERKTFMAAREHQADAEELARHKIFIEGIENPLWAEI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagataattttcgatacagaaaccaccggctttgaccctcaaaatggcgaccgg
atggtggaaatcggttgcattgaaatgatcgatcgaatcgaaaccggtcagagcttccat
tgctattataatccccagcggacgatgcctaaagccgccgagaatgtgcatggattgtca
gatgtgtttttatccgacaagaaattattcgcagacggcgcggcggaacttctcgatttt
ctgggagacgcgaagctcgttgcccataatgcgcaatttgacttcaattttctcaacgcc
gaactgcttctgtgcggctatcgggaaatttcccggtttcgcatgatcgatacattggca
atcgccaagtccaagcatcccggcgcaaaattgtcgcttgatgccttgtgctcccgctac
ggcatcgaccgtagccaccgggttaaacatggtgcgttgcttgatgcggaactgctaagc
cagctttatatcgagttgaccggtggacgccagatcggccttggcctggcagaagatacg
aagcgtcaagatgccatcgccagcatgcgaccgacatcgaggcccgctgagcgcaagaca
ttcatggcggcgcgcgagcatcaggccgacgccgaagaactggcaagacacaagatattt
attgaaggtatcgaaaaccctctctgggcagagatttag
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