Sphingorhabdus sp. M41: AZE99_00540
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Entry
AZE99_00540 CDS
T04317
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg00061
Fatty acid biosynthesis
sphg00071
Fatty acid degradation
sphg01100
Metabolic pathways
sphg01212
Fatty acid metabolism
sphg02024
Quorum sensing
sphg04146
Peroxisome
Module
sphg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AZE99_00540
00071 Fatty acid degradation
AZE99_00540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AZE99_00540
09145 Cellular community - prokaryotes
02024 Quorum sensing
AZE99_00540
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphg01004
]
AZE99_00540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphg04147
]
AZE99_00540
Enzymes [BR:
sphg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AZE99_00540
Lipid biosynthesis proteins [BR:
sphg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AZE99_00540
Exosome [BR:
sphg04147
]
Exosomal proteins
Exosomal proteins of breast milk
AZE99_00540
Exosomal proteins of breast cancer cells
AZE99_00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMO70538
LinkDB
All DBs
Position
complement(102070..103560)
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AA seq
496 aa
AA seq
DB search
MSELPRLCSELLARPGGTEVVEFEGKWYGWDDLCQLGDRLTDLLDASGVAADAPVTFIPR
NRPWAIAALFTLLSQGRTIRMVYAFQSPAGIIRDIERLASPIVVAAAQEFEPEVVEAMQG
FGYAGIALDELAADAVPGLETVNEKANINPAGEPRVEILTSGTTGPPKQFPVEYAMIEKL
LAGGTTGNQQASDAASQPPMLLYMPIGNISGIYSTIPTFLRGHRAVLHDRFSLAKWREFI
ATYQPKISGLPPAGVQMVLDADVPKEELAGLMAIGTGAAPLDPSVQRAFEDHYGIPILIS
YGATEFGGPVTSTSLKDIEEFGNTKIGSVGRPIGGAQLRVTDAESGEELPLASEGILEVI
SPRIGPDWIRTSDLAMIDEDGFLYLRGRADGAIIRGGFKILPEAIERALLLHPDISAAGV
VGVKDRRLGEVPGAAIQIKPGHDAPGPDAIETHLREHVMATHIPVHWRFVDELPKTLSFK
VHRPALCELFADVAAD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacttcccagactatgttccgaacttctggcccgtcccggcgggaccgaggtc
gtggagttcgaggggaaatggtacggctgggacgatctgtgccagcttggagacaggctg
accgatctgctcgacgccagcggcgtggcggccgatgcgccggtcaccttcatcccgcgc
aaccgtccatgggcgattgccgcgcttttcaccctgctgtcgcagggtcgcacgatccgg
atggtttatgccttccagtcgcctgccgggatcatcagagacattgagcgccttgcatcg
ccgatagtggtcgccgcagcgcaggaattcgagcctgaagtcgtggaagcgatgcagggc
tttggttatgccggtatcgcgctcgacgagcttgcagcggacgctgttccgggactggaa
accgtcaatgaaaaagcaaatatcaacccggccggcgaaccgcgcgttgaaattctgacc
agcggtaccaccggcccgcccaaacaattccccgtcgaatatgctatgatcgaaaaattg
ctggcaggcggcacgaccggcaaccagcaggcgagtgacgcggcgagccagccgcccatg
ttgctgtacatgccgatcggcaatatttcgggcatctattcgaccatcccaactttcctg
cgcggacatcgggcggtgctgcacgatcgtttcagccttgccaaatggcgcgaattcatc
gcgacttatcagccgaaaatttccggtcttccgccggccggcgtgcagatggtgcttgat
gcggatgttccgaaagaggaactcgccggcctgatggccatcggcaccggcgctgctccg
ctcgacccgtcggtccagcgcgcgttcgaggatcattatggcatcccgatcctgatctcc
tatggcgcaaccgaatttggcggaccggtaacgtccaccagcctcaaggatatcgaggag
ttcggaaacaccaagatcggcagcgtcggccgcccgatcggtggcgcgcaattgcgcgtg
accgacgcggagagcggagaagaactgcccctggccagcgaagggatattggaagtcatt
tccccgcgtatcggtccggactggatccgcacttcggatcttgccatgattgacgaagac
ggtttcctctatctgcgcggccgggccgacggcgcgatcatccgcggcgggttcaagata
ttgcccgaagccatcgaacgggcgctgttgctgcatcccgacatttccgccgccggcgtg
gtcggcgttaaggaccgtcggctgggcgaagttccgggcgctgcgatccagatcaagccg
ggacatgacgcccctggcccggacgcgatcgaaacccatttgcgggaacatgtgatggca
acgcatattccggtgcattggcgcttcgtcgacgaattgcccaagacgctgtcgttcaag
gtgcatcggcccgcgctttgcgaattatttgccgatgtcgcagccgactga
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