Sphingorhabdus sp. M41: AZE99_01290
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Entry
AZE99_01290 CDS
T04317
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sphg
Sphingorhabdus sp. M41
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphg03016
]
AZE99_01290
Enzymes [BR:
sphg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AZE99_01290
Transfer RNA biogenesis [BR:
sphg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AZE99_01290
Prokaryotic type
AZE99_01290
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
FixQ
PepSY_TM
Motif
Other DBs
NCBI-ProteinID:
AMO73161
LinkDB
All DBs
Position
261794..262867
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AA seq
357 aa
AA seq
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MKPILAGLLLLVVLLAGAAWIFRPQIGERLFARAVETAVSRDIIGDLPDGINVALCGSGS
PLPDPTRAGPCSAVIIDGKIFIVDIGGGAVRNLGLMGLNPGATEALLLTHFHSDHIDGMG
ELMLQRWAGGGRDAPLPVIAPEGVEVIVDGLNAAYAADVQYRIAHHGKATMSLTGAGGKA
KPFSIPEAQQMMVVYEKDGIKITAFSVAHKPISPAVGYRFDYKGRSVVFSGDTVKLPIVA
KACNGCDLLVHEVLNAEMVGTVEAAFEKAGRKRMVKIMSDIPDYHTTPVEAAETAKAAKA
KMLVFSHIVPALPLAYLDGYFMKGVDVAYDGPTVLGKDGMLFSLPANKDSIEQGDLL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattctggcgggcctgctgctgttggtggttctgctcgctggggctgcatgg
atttttcggccacagatcggtgaacggttattcgcccgggccgtcgaaaccgccgtttcg
cgcgatattatcggcgatctgccggacggtatcaatgtcgcgctttgcggttccggttcg
ccgctgcccgatccgacccgggccggtccttgctcggctgtgatcatcgacggcaagatt
ttcatcgtcgacattggcggcggcgcggtgcgcaatctgggcctgatggggctgaaccct
ggtgcgaccgaggctttgttactgacccattttcacagcgatcatatcgacggcatgggg
gaattgatgctgcagcgctgggctggcggtggccgcgacgcgcctttgccggtgattgca
ccggaaggggtggaagtgatcgtcgacggcttgaacgccgcttatgcggctgacgttcag
tatcgtattgcccaccatggcaaagcgacgatgtccctgaccggagcgggcggcaaggca
aagccattttctattcccgaagcgcagcagatgatggtggtatacgagaaggatggcatc
aagattaccgccttttccgtggcccacaaaccgatctcgcccgccgtcggttataggttt
gattataaaggccgctctgtggtgttcagcggggacacggtcaaactcccgattgttgcg
aaagcctgcaacggttgcgacttgctggtgcatgaagtgctgaatgccgagatggtggga
accgtggaagccgcattcgagaaagccggtcgcaagcggatggtgaaaatcatgtcggac
attccggactatcacacaacgccggtcgaggcggcggaaacggcgaaggcggcaaaggcg
aaaatgctggtcttctcgcatatcgttccggcattgccgctcgcctatctggacggctat
ttcatgaagggtgtcgacgtcgcttatgatggcccgacagtgctgggcaaggacgggatg
ctgttcagccttcccgccaataaggatagtatcgaacagggcgatcttctttaa
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