Sphingorhabdus sp. M41: AZE99_01330
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Entry
AZE99_01330 CDS
T04317
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg03030
DNA replication
sphg03410
Base excision repair
sphg03420
Nucleotide excision repair
sphg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZE99_01330
03410 Base excision repair
AZE99_01330
03420 Nucleotide excision repair
AZE99_01330
03440 Homologous recombination
AZE99_01330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphg03032
]
AZE99_01330
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_01330
Enzymes [BR:
sphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZE99_01330
DNA replication proteins [BR:
sphg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AZE99_01330
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AZE99_01330
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZE99_01330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
HHH_2
HHH
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
AMO73162
LinkDB
All DBs
Position
268959..271763
Genome browser
AA seq
934 aa
AA seq
DB search
MTDPTDSKPNHLYLVDGSAYIFRAYHRLPPLTNVRGEPVGAVYGYTTMLWKLADELNKAD
GPTHMAVVLDKAGTSFRNDLYDQYKANRPEAPEDLKPQFPMIRDATRAFSLPLIEEENVE
ADDMIASYTKAALAKGWHVTIVSSDKDLMQLIEPNDEGRVDMLDTMKNARMNRATVEEKF
GVGPEKLGDVLGLMGDSSDNIPGVPGIGPKTASKLINEFGDIESVLAAAPEMKKSKMRDN
LIEFADQARLSRVLVTLRDDCPLPDTLESFLIQDIPDAPLREFLADHGFNSLLKKLGGDG
HVEPQNPDVADNSSAAPVPKLPDAPAIDRSKYECVQTMAALDQWIARATENGVCAVDLET
DSLESVTARIVGVCLATGPNEACYIPLGHGSGDMFGETPDQIGLDEALARLKPLLENDAV
LKVGQNLKYDMGVLAQHDIRIAPFDDTLVMSFNLDAGLHGHGMDELSKLHLGHECISFKS
ITGTGKKAIGFAEVPLDKATEYGAEDADVTLRLWEILRLRMVPERATRVYQMVDRPLVPV
IAGMEATGVLVDREELARLSKTFAEEMEKLEAQIHELAGEPFSIGSPKQLGEILFGKLGL
KGGKKGKSGQYSTDVTVLERLAGDGEPIAQKVVDWRQLAKLKSTYTDALQEQINTKTGRV
HTSYSLSGAQTGRLSSTEPNLQNIPIRTEIGRQIRQAFVAAPGNVILAADYSQIELRLAA
HIADVETLKEAFANGEDIHNRTARELFGTEDRDARARAKTINFAILYGISRWGLAKRLEV
DADEAQNMIDTYFERFPGINQYISKTLQSVRETGYTETLFGRKTWFERIKSPNQAERQGS
ERAAINAPIQGTSADIIKRAMARMLPALAEAGLGKVQMLMQVHDELVFELPEGDVEAASE
VIRSVMSGAAEPAVKLSVPLDVDIGTGKSWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccctacagacagcaaacccaatcatctctatctcgttgacggctcggcctat
attttccgcgcctatcatcgcctgccgccgctgaccaatgtgcgcggcgaaccagttggt
gcggtctatggctataccaccatgttgtggaaactggccgacgaactcaacaaggcggac
ggtccgacccatatggcggtggtgctggacaaggcgggtaccagtttccgtaatgatctc
tacgatcaatataaagccaatcgtccggaagcaccggaagacctgaaaccgcaattcccg
atgatccgcgacgcgacgcgtgctttctcgttacccctgatcgaagaagagaatgtcgag
gccgacgatatgatcgcctcctataccaaggctgcactggcaaagggctggcatgtcacg
atcgtatcgtccgacaaggacctgatgcagctgatcgagcccaatgatgaaggccgggtc
gacatgctcgacacgatgaagaacgcgcggatgaaccgggctacggtcgaagagaaattt
ggcgtcggtccggagaagctgggcgatgtgctcggccttatgggcgacagttcggacaat
atccccggcgttcccggtatcgggccgaaaaccgcgtcaaaactgatcaacgaatttggt
gatattgaaagcgtgctcgccgccgcgccggagatgaagaaatccaagatgcgcgataat
ctgatcgaatttgccgatcaggcacgattgtcgcgggtgctggtgactttgcgggacgat
tgcccgctgcccgacacgctggagagtttcctcattcaggatattcccgatgcgccgctg
cgcgaatttcttgcggatcacgggttcaacagtctgctcaagaaacttggcggcgatggc
catgtcgagccgcaaaaccccgatgtggcggacaattcttcggccgccccggttcccaaa
ttgccggatgccccggctattgaccggtcgaaatatgaatgcgtgcagacaatggcggcg
ctcgatcaatggatcgctcgtgcgactgaaaatggcgtctgtgcggtcgatctggagacc
gacagtctcgaaagcgtgaccgcgcggattgtcggcgtctgtctggccactggccccaac
gaagcctgctatattccactcggccatggcagcggcgatatgtttggcgagaccccggat
cagatcggtctggatgaagcactggccaggctgaagccgttgctcgagaatgatgcggtg
ctcaaggtcgggcagaatctgaaatatgacatgggcgtgctggcgcagcatgatatccgg
attgcgccgtttgacgacacattggtgatgagcttcaatctcgatgccggcttgcacggc
catggcatggacgaactcagcaagttacatctcggtcatgagtgcatcagtttcaaatcg
atcaccggtacaggcaagaaggcgatcggctttgccgaagtgccgcttgacaaggcgacc
gaatatggcgcggaagatgccgatgtcacgctgcgcctttgggaaatcctgcgcttgcgg
atggtcccggaacgggcgacccgcgtctatcagatggttgaccggccgctggtgccggta
atcgccggaatggaggccaccggcgtgctggtcgaccgcgaggaactggcgcggctgtcc
aagacatttgccgaggaaatggaaaagctggaagcacaaattcatgagcttgccggagag
cctttctccattggcagtcccaagcaattgggcgaaatcctgttcggcaagcttggcctg
aaaggcggcaagaagggcaagtcggggcaatattcaaccgatgtaaccgtgctcgagcgg
ctggctggagacggcgaaccgattgcgcagaaggtcgtcgactggcggcagttggcgaag
ctgaaatccacctataccgatgcgctgcaggaacagatcaacaccaaaacagggcgtgtg
cacacgtcctacagcctcagcggagcacagaccggacgactgtcctcgaccgaaccgaac
ctgcagaacatcccgatccgaacagagatcgggcggcagataaggcaggcctttgtcgct
gcgccgggcaatgtcattctcgctgccgattacagccagatcgaactcaggctggcggcg
catatcgccgatgtggagacgctgaaagaggcttttgcaaacggcgaggatatccataac
cgaaccgcgcgcgaactgttcggcacggaagaccgtgatgcacgcgctcgggccaagacg
atcaatttcgcgatcctgtatggcatttcgcgctggggtctggccaagcggctcgaggtc
gatgcggacgaagcgcagaatatgatcgacacctatttcgagcgttttcccggcatcaac
caatatatttcgaagacgctgcaatcggttcgcgagaccggctataccgagacattattc
ggtcgcaagacatggttcgagcggatcaaatcccccaatcaggctgaacgccagggcagc
gagcgggctgcgatcaacgcgccgatccagggcaccagtgcggacatcatcaagcgggcg
atggctcgaatgctgccggcattggccgaggccggcctgggcaaggtccagatgctgatg
caggtccacgatgaactggttttcgaattgcccgagggtgatgttgaagctgccagcgaa
gtgatccgttcggtgatgtccggtgcggcggaaccggcggtgaaattatccgtgccgctg
gatgtggatattggcaccggcaagagctgggaccaggcgcactag
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