Sphingorhabdus sp. M41: AZE99_02245
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Entry
AZE99_02245 CDS
T04317
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sphg
Sphingorhabdus sp. M41
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphg03032
]
AZE99_02245
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_02245
Enzymes [BR:
sphg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AZE99_02245
DNA replication proteins [BR:
sphg03032
]
Prokaryotic type
DNA Topoisomerases
AZE99_02245
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZE99_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AMO70832
LinkDB
All DBs
Position
complement(454947..457463)
Genome browser
AA seq
838 aa
AA seq
DB search
MSDISNDDKPEDASNSSNQNEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEV
SDNAIDEALAGHCDLILITLNADGSVSVEDNGRGIPTGMHSEEGVSAAEVIMTQLHAGGK
FENTSDDNAYKVSGGLHGVGVSVVNALSEWLELDIWRDGKEHNMRFEFGDAVRPLKIVGD
APPADNKTGFKKGTKVTFFPSPATFKITEFDFEKLEHRYRELAFLNSGVHIILRDARHEE
AKEIDLFYEGGIAAFVQYLDRNKTPLVPEPIAIHGDRDDVIIDVALEWNDSYYENVLCFT
NNIPQRDGGTHLAAFRSALTRTLNNYAESSGALKKEKVKLTGDDMREGLSAIVSVKLPDP
KFGSQTKDKLVSSEVRQPLESLMADKLAEWLEENPQNAAMVIQKVIDAAAAREAAKKARE
LTRRKGAMDIASLPGKLADCREKDASKCELFLVEGDSAGGSAKQGRDSMYQAILPLKGKI
LNVERARFDRMLSSKEVGTLIQAMGTGIGRDDFNLEKLRYHKIVIMTDADVDGAHIRTLL
LTFFYRQMPEIILNGHLYIAQPPLYKVGKGKSEVYLKDDNALDQYLVEAGLNGMILQTGE
GARSGDDLRGLIEHARRMRSLMAYVPRRYDSTIVEGMALTGALNPDHGNAERQAAVDATA
AWMDKVDEEGRWSGQVSEEGGYLFQRFWRGVTDHHIIEAKFLESAEARKLHRLASEETAT
YGSGSRLVKSATGDTEAGDDDAIGSEGTLITRPSELLDTVMAAGRKGLAISRYKGLGEMN
AEQLWETTLDPEVRSLLQVTVEQADVTDDIFTKLMGEVVEPRREFIVDNALNVANLDV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacattagcaatgacgataagccggaagatgcttccaattcttccaatcaaaac
gaatatggcgcggattcgatcaaggttctcaagggcctcgatgcggttcgcaaacgcccc
ggcatgtatatcggcgacaccgatgacggcagcggcctgcatcacatggtgttcgaggta
tcggacaacgcgatcgacgaggccctcgccggccattgcgacttgatcctgatcacgctc
aacgccgatggcagcgtttcggtcgaggacaatggccgcggtatcccgaccggcatgcac
agcgaggaaggcgtctcggcagccgaggtcatcatgacccagctccacgccggcggcaag
ttcgagaatacctccgacgacaatgcctacaaggtctccggcggtctccacggcgtcggc
gtatcggtggtcaatgcgctgtccgaatggctggaactcgatatctggcgcgacggcaaa
gagcataatatgcgctttgaattcggcgatgccgtacggccgctaaagatcgtcggcgat
gctccgccagcggacaacaagaccggcttcaagaagggcacgaaagtcaccttcttcccg
tctcccgcaaccttcaagattaccgaattcgatttcgagaagctcgagcaccgctaccgc
gaactcgccttcctcaacagcggcgtgcacatcatcctgcgcgacgcgcggcacgaagag
gcgaaggaaatcgatctgttctacgaaggcggaatcgccgccttcgtgcaatatctcgac
cgcaacaagacgcctctggtgcccgagccgatcgccatccacggcgaccgcgacgatgtc
atcatcgacgtcgcgctcgagtggaacgacagctattatgaaaatgtcctctgcttcacc
aacaatatcccgcagcgcgacggcggcacccatctggccgccttccgctcggcgctgacc
cggacgctcaacaattatgccgaaagttccggcgcgctgaagaaagaaaaggtcaagctg
accggcgacgacatgcgcgaaggcctgtccgctatcgtatcggtcaagctgcccgatccc
aaattcggttcacagaccaaggacaagctggtctcctccgaagtgcgtcagccgctggaa
agcctgatggccgacaagctcgccgaatggcttgaggaaaacccgcaaaacgccgcgatg
gtcatccagaaggtgatcgacgctgctgctgcccgggaagcggcgaaaaaagcccgcgaa
ctgactcgccgcaagggcgcgatggacattgcttccctgcccggcaagctcgccgattgc
cgcgaaaaagacgcaagcaaatgcgaactcttcctggtggaaggggactccgctggcggc
tcggccaaacagggccgcgacagcatgtatcaggcgatcctgccgctcaagggcaagatc
ctcaatgtcgaacgagcccgtttcgaccggatgctctcgtccaaggaagtcggcacgctg
atccaggcaatgggcaccggcattggccgtgacgattttaatctggaaaaactgcgctat
cacaagatcgtcatcatgaccgatgctgacgtcgacggcgcacatatccgcaccttgctt
ctcaccttcttctaccgccagatgccggagatcattctcaacggtcatctctacatcgcc
cagccaccgctctacaaggtcggcaagggcaagagcgaagtctacctcaaggatgacaat
gcgctcgaccaatatctggtcgaggccggcctgaacggcatgatcctgcaaaccggcgaa
ggcgcgcgcagcggcgacgatctgcgcggcctgatcgaacatgcccggagaatgcgcagc
ctgatggcttatgtgccgcggcgctacgacagcaccattgtcgagggaatggccctcaca
ggcgctctcaatcccgatcacggcaatgcggaacggcaagccgccgtcgatgcaaccgcg
gcctggatggacaaggtcgacgaggaaggccgctggtccggtcaggtttccgaagaaggc
ggctatctgttccagcgtttctggcgcggcgtcaccgatcaccatatcatcgaagcgaaa
tttctcgagagtgcagaagcccgcaaactccatcgcctcgcctcggaagaaaccgcaacc
tatggcagcggcagccggctggtgaaatcggccactggcgacacggaagccggagatgac
gacgccatcgggtctgagggcacgctgatcacgcgcccatcggaactgctcgacaccgtc
atggcggcaggccgcaagggtctcgccatttcccgctacaagggtctcggcgagatgaac
gccgagcagctttgggaaacgacactcgaccccgaagtgcgctcgctgttgcaggtgacc
gtcgaacaggccgatgtgacagacgatatcttcaccaagctgatgggtgaagtggttgaa
ccgcggcgcgaattcatcgtcgacaacgcgctgaacgttgccaacttggacgtttag
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