Sphingorhabdus sp. M41: AZE99_06980
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Entry
AZE99_06980 CDS
T04317
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg03030
DNA replication
sphg03430
Mismatch repair
sphg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZE99_06980
03430 Mismatch repair
AZE99_06980
03440 Homologous recombination
AZE99_06980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphg03032
]
AZE99_06980
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_06980
Enzymes [BR:
sphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZE99_06980
DNA replication proteins [BR:
sphg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AZE99_06980
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AZE99_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
AAA_assoc_2
AAA_16
AAA_30
AAA_19
AAA_14
Cdc6_lid
DUF815
AAA_18
EF-hand_1
Glyco_tranf_2_5
AAA_2
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AMO73283
LinkDB
All DBs
Position
1460104..1461810
Genome browser
AA seq
568 aa
AA seq
DB search
MFAATGVDAPDQPAPAAAQPYRVLARKYRPSKFSELIGQDAMVQTLGNAIKRDRLAHAFL
MTGVRGVGKTSTARLIAKALNCIGEDGEGGPTIDPCGQCEPCQSIATGSFIDVIEMDAAS
HTGVDDVREIIEAVRYSSVSARYKIYIIDEVHMLSKNAFNALLKTLEEPPPHVKFIFATT
EVHKVPITVLSRCQRFDLKRISADQLSQHFGMIVGKEGVSAEQEALDLIAQAAEGSVRDG
LSILDQAIAHADMDGDGEVKAAQIRDMLGLSDRSAVRRLFAQLLEGDSAALLDAIAEQYR
IGVEPLSLMNGLLSLSHQVTLFKVGRASDPTLSDAARQQFSDWSEQLSYPVLHRLWQLLL
KGYQEVQQAHLPREACEMALLRVLCAADMPDPGKLGKMLEQSRPATASAPENQQSAPPVA
EPVAQMIAEPVAPQKQHEPQTGALPSKFTDIVTAVGRVSAVLESILIADMRVVSLNAPDL
VYQPVRTIAEADIRKIAGALKQETGQEWNITEGPGEAEPSLAEQEQMARDAERQAILDAP
LVKAAFEAFPDAVLLENDDPRPQESRSA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atattcgcggccaccggtgtcgacgcgccggatcagcccgctccggctgcggctcaaccc
tatcgggtgctggcgcgcaaatatcggccgtcaaaattttctgagctgatcggtcaagat
gcaatggtccagacgctgggcaacgcgatcaagcgcgaccggcttgcgcatgcgtttctg
atgactggcgtacgtggcgtcggcaaaacatccactgccaggttgattgctaaggcgctg
aactgcatcggcgaagatggggagggcggcccgacgatcgatccctgcggtcagtgcgaa
ccttgccagagcatcgccacaggcagctttatcgatgtaatcgaaatggatgccgcaagc
catacgggcgtcgacgatgtccgggagattatcgaagcggtgcgctattcatcggtttcg
gcgcgctataaaatctacatcatcgacgaagtgcacatgctgtcgaaaaatgctttcaat
gcgcttttgaagacgctcgaagagccgccgccgcatgtgaaattcattttcgccacgacc
gaagtccacaaggtcccgatcaccgtcctgtcgcgttgtcagcgctttgacctgaagcgg
atcagcgccgatcagctatcgcaacatttcggcatgatcgtcgggaaagaaggcgtgtcc
gcagagcaggaagcgctggatctgatcgcacaggcagccgaaggctcggttcgcgatggt
ctttcgattctcgatcaggcgattgcccatgccgatatggatggcgatggcgaggtcaag
gctgcccagatccgcgacatgcttggtctttcggatcgcagtgcggtccggcggctgttt
gcccaattgctcgaaggcgattcggctgcgctactggatgcgatcgccgaacaatatagg
attggcgtcgaaccgctgtcgctgatgaacgggctgctttcgctctcgcatcaagtgacc
ctgttcaaggttggcagagcgagtgatccgacactgtcagacgccgcccggcagcaattt
tccgactggtcggaacagctttcctatccggtgctgcatcggctctggcagttgctgctc
aagggctatcaggaagttcagcaagcgcatctgccgcgcgaagcctgcgaaatggcgctg
ctacgtgtgctttgtgccgccgatatgcccgatccgggaaaactggggaaaatgctggag
cagagcaggccggcgaccgccagcgcgccggaaaatcaacaatctgcaccacccgtggcc
gaacctgtcgcgcagatgattgctgagcccgttgctccgcaaaagcagcatgaaccgcaa
actggcgcgctgccctccaaattcaccgatattgtcaccgccgtcggccgggtttccgct
gttctggaaagcatattgattgccgacatgcgggtcgtttcgctcaatgcacccgacctt
gtctatcagccggtgcgtacaatcgccgaggcagatatccggaaaattgccggagcgctg
aagcaggaaaccggtcaggagtggaatatcaccgaagggccgggtgaagcggagccgagc
ctcgccgaacaggaacagatggccagagatgctgaacgacaggcaatattggatgcgccg
ctggtaaaagccgcttttgaagcttttcccgatgccgtcctgctggaaaatgacgaccca
cgcccacaagaatcaaggagcgcttag
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