Sphingorhabdus sp. M41: AZE99_09010
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Entry
AZE99_09010 CDS
T04317
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZE99_09010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphg03019
]
AZE99_09010
03016 Transfer RNA biogenesis [BR:
sphg03016
]
AZE99_09010
Enzymes [BR:
sphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AZE99_09010
Messenger RNA biogenesis [BR:
sphg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AZE99_09010
Transfer RNA biogenesis [BR:
sphg03016
]
Prokaryotic type
tRNA degradation factors
AZE99_09010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
LPD3
CSD
S1_2
Motif
Other DBs
NCBI-ProteinID:
AMO71967
UniProt:
A0A127MFH3
LinkDB
All DBs
Position
complement(1890281..1892566)
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AA seq
761 aa
AA seq
DB search
MFDIKKVEMEWGGQTLTLETGRIARQADGAVLATLGETVVLCAVTAAKSVREGQDFFPLT
VHYQEKFSAAGRIPGGFFKREGRATEKETLTSRLIDRPCRPLFPEGFYNEINVICQVMSY
DGVNEPDILAMVAASAALTISGVPFMGPIGAARVGYKEGEYQLNPSMEEVAEGELDLVVA
GTMGAVMMVESEAQELSEEVMLGAVQFAHDASKQVAGLIIDLAEQAAKEPWKLDAGDDNS
GIKEELRKLVGKDIAAAYKKTDKSERSNALNAVRDKAKEKYADADGQTQMTAGKMVKKLE
AEIVRGAIIKDGTRIDGRKLDQVRPIEAMVGLLPRTHGSALFTRGETQAIVTTTLGTKDA
EQMIDGLDGLSYTNFMLHYNFPPYSVGEVGRFGFTSRRETGHGKLAFRALRPVLPTVEEF
PYTIRVLSDITESNGSSSMATVCGGSLAMMDAGVPLARPVSGIAMGLILEGEEFAVLSDI
LGDEDHLGDMDFKVAGTEKGITSLQMDIKVAGITQEIMKSALEQASGGRAHILGEMSKAL
SGTRTEMSEHAPRIETLQINKEKIREVIGTGGKVIREIVAETGAKVDIDDEGLIKVSSSD
KSQIDAAIAWIKGIVEEAEVGKVYDGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERVEK
VSDELSEGQEVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPAREPRGDKPRGPRRDG
GGRGRDGGGRGRDGGGRGRNNDGPKDEGGGDIPLPASITED
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcaagaaagttgaaatggagtggggcggacagaccctcaccctcgaaacg
ggccgtattgcccgtcaggctgatggcgcggtactcgcgaccctcggcgaaacagttgtg
ctgtgcgcagtaaccgctgctaaatccgtgcgcgaagggcaggatttctttccgctcacc
gttcactatcaggaaaaattctcagccgccggtcgtatcccgggcggtttcttcaagcgc
gaaggccgcgcgacggaaaaagaaacgctgacgtcgcgtttgattgaccgtccttgccgt
ccgctgttcccagaaggtttctacaacgaaatcaacgtcatctgtcaggtgatgagctat
gatggcgtcaacgaacccgatattttggcaatggttgcagcttctgctgcgctgaccatc
tccggcgttcccttcatgggcccgatcggcgcggctcgcgttggctacaaagaaggcgaa
tatcagctgaacccaagcatggaagaagttgctgaaggcgaactcgatctggttgtggcc
ggaacgatgggcgctgtgatgatggttgaatcggaagcacaagagctttccgaggaagtc
atgctcggcgccgtacaattcgctcatgacgcatccaagcaggttgccggtctgatcatc
gatctggctgaacaggctgcgaaagagccctggaagcttgatgctggcgatgacaatagc
ggtatcaaggaagaactgcgcaagctggtcggaaaagatattgctgcggcttacaagaag
accgacaagtcagagcgtagcaacgcactgaatgcggttcgcgacaaagccaaagaaaaa
tatgccgatgcagacggccagacccagatgaccgccggcaagatggtcaagaagctggaa
gccgaaatcgttcgcggtgcgatcatcaaggatggtacccgtatcgatggccgcaagctc
gatcaggttcgcccgatcgaagccatggttggcctgctgccacggacccacggttcagct
ctgttcacccgcggtgaaacacaggcaatcgtgaccacgactctgggcaccaaagatgcc
gagcagatgatcgatggtctcgacggtctgagctacaccaacttcatgttgcactataac
ttccctccctattcggttggtgaagttggccgtttcggatttaccagccgccgcgaaacc
ggccacggcaagctcgctttccgcgcgcttcgcccggtattgccgacagtggaagaattt
ccatatacgatccgtgttctctcggacattaccgaatccaacggttcgtcctcgatggcg
accgtttgtggcggttcgcttgcaatgatggacgctggtgtgcctctggcgcgtccggtt
tccggtatcgcgatgggcctgatcctcgaaggcgaggaattcgcggttctttccgacatt
ctcggcgacgaagatcatcttggcgacatggacttcaaggttgcgggtaccgaaaagggt
atcacttccttgcagatggacatcaaggtagctggcattacgcaggaaatcatgaagtct
gctctggaacaggccagtggcggtcgcgctcatatcctcggtgaaatgagcaaggccctt
agcggcacccggaccgaaatgtcggaacatgctccgcgcatcgaaaccttgcagatcaac
aaagagaagatccgcgaagttatcggtactggcggtaaggtgatccgcgaaatcgttgcg
gaaaccggcgcgaaggtcgatatcgacgacgaaggcctgatcaaggtttcctcttccgac
aaatcccagattgatgcagcaattgcgtggatcaagggcattgttgaagaagccgaagtc
ggcaaagtctatgacggcaaggtcgtgaacctcgtcgactttggcgcattcgtgaacttc
atgggcggcaaggacggtctcgtccacgtttctgaaatcaagaatgagcgggtcgagaaa
gtctctgacgaactgagcgaaggccaggaagtcaaggtcaaggttctcgaaatcgatcag
cgtggcaaggttcgcctttcgatgcgggttgttgatcaggaaaccggggaagagctggaa
gatacccgtcctgctcgcgaaccacgcggtgacaagcctcgtggaccacgtcgtgatggc
ggtggtcgcggacgcgacggtggcggacgtggccgtgacggcggcggacgtggccgcaac
aatgatggtcccaaggatgaaggcggcggtgatattccattgccggcttcgatcaccgaa
gactag
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