Sphingorhabdus sp. M41: AZE99_11850
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Entry
AZE99_11850 CDS
T04317
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sphg
Sphingorhabdus sp. M41
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphg03032
]
AZE99_11850
03036 Chromosome and associated proteins [BR:
sphg03036
]
AZE99_11850
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_11850
DNA replication proteins [BR:
sphg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AZE99_11850
Chromosome and associated proteins [BR:
sphg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AZE99_11850
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AZE99_11850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HMG_box
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AMO72452
UniProt:
A0A127MGN9
LinkDB
All DBs
Position
2509013..2509294
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELLEKLAEENPELKPDEIEKMVDLFFNQISQKLAEGGRVELRGFGAFSTRQRKPRT
GRNPRTGESVEVPAKRVPYFKPGKEIRERLNKS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatacgttctgaactattagaaaaactggctgaagaaaatccggaactgaaaccggat
gaaatcgaaaaaatggtggacttgtttttcaaccagatcagccagaaactggccgaaggt
ggtcgtgttgaacttcgtggatttggagctttctcgacccgccagcggaaaccgcgcacc
ggtcgcaacccgcgcacaggggaatcggtagaggtcccggctaaacgagtaccctatttc
aagcccggcaaggaaattcgtgagcggttgaacaaaagctga
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