Sphingorhabdus sp. M41: AZE99_12160
Help
Entry
AZE99_12160 CDS
T04317
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphg
Sphingorhabdus sp. M41
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphg03032
]
AZE99_12160
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_12160
Enzymes [BR:
sphg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AZE99_12160
DNA replication proteins [BR:
sphg03032
]
Prokaryotic type
DNA Topoisomerases
AZE99_12160
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZE99_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Phage_HK97_TLTM
Motif
Other DBs
NCBI-ProteinID:
AMO72504
UniProt:
A0A127MGW3
LinkDB
All DBs
Position
complement(2565362..2566369)
Genome browser
AA seq
335 aa
AA seq
DB search
MIHDSSLRIPSLVYTSDDEPGISRVRRGRGFQYLLPDRSPLKCSVELARIRKLGVPPAYT
DVWICVKANGHIQATGFDAATRKQYRYHDQWRVYRDQQKFESLSEFATTLPRIRRKVNEL
LRPEGAADVLSKDVAIAALVRLIDRTAIRVGGTSKMSKGATTLDNRNVTYGEDLMRLRYR
AKGGKKVSCSLRDTRLQKILEQIDDLPGKRLFQYVGSDDAVHPLDSGDVNDWLKEASGMD
SLSAKMFRTWHGSVAAMDAIASEENPTIKQACEAAAATLRNTPAICRKSYVHPAVFDLIE
MEAGERLAMIEGKSANITGLRVGENRFVGLIGGGR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatccatgattcttcactccgtatccccagcctggtctataccagcgacgatgagccc
ggcatctcgcgggtgcggcgggggcgggggtttcaatatctgctgcccgacaggagcccg
ctgaaatgcagcgtcgaactggcgcggatcaggaagctgggcgtgccgcccgcttatacc
gacgtgtggatttgcgtgaaggccaatggccatattcaggcgaccggtttcgatgcggcg
acgcgcaagcaatatcgctatcatgaccagtggcgcgtctatcgcgatcagcagaaattt
gagtcgctttccgaatttgcgacgacgctgccgcggatccggcgcaaggtgaatgaactg
ctcaggcccgagggggcggccgatgtgctgagcaaggatgtggcgattgcggcgctggtc
cggctgattgaccggaccgcgatccgggttggcgggacatccaagatgagtaagggggcg
accacgctcgacaatcgcaatgtgacctatggcgaagatctgatgcgcctgcgctatcgc
gccaagggcgggaagaaagtgagctgcagcctgcgggacacgcggctgcagaagatattg
gagcagatcgacgatctgcccggcaagcgactgttccaatatgtcggcagcgacgacgcg
gtgcatccgctcgacagcggcgacgtcaacgactggctgaaggaagcgtcgggcatggac
agcctcagcgccaagatgttccgcacctggcacggcagtgttgccgcgatggacgcgatc
gcttccgaggaaaacccgacgatcaagcaggcctgcgaagccgccgccgcgaccctgcgc
aacacgccggcgatttgccgcaagagctatgtccatccggcggtgttcgacctgatcgag
atggaggccggtgagcggctggctatgattgaaggcaagagcgcgaatattaccggcttg
cgggtgggagagaaccggtttgtcgggttgatcggtgggggacgttga
DBGET
integrated database retrieval system
