Sphingorhabdus sp. M41: AZE99_14085
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Entry
AZE99_14085 CDS
T04317
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg00300
Lysine biosynthesis
sphg00470
D-Amino acid metabolism
sphg01100
Metabolic pathways
sphg01110
Biosynthesis of secondary metabolites
sphg01120
Microbial metabolism in diverse environments
sphg01230
Biosynthesis of amino acids
Module
sphg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AZE99_14085
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AZE99_14085
Enzymes [BR:
sphg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AZE99_14085
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMO72826
UniProt:
A0A127MHW6
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Position
complement(2955565..2956824)
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AA seq
419 aa
AA seq
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MDHFQLKNGILHAEDIPLPQIAKEVGTPVYVYSRATLERHARVFREGLKDAGKIHLAFAV
KANPNLAVLRILANQGYGADVVSGGELQRALAAGMKAEDIVFSGVGKSREELTLGLDKGI
GQFNLESEEEGVMLAEIAAARGEKASATLRVNPDVDAGTHAKISTGKKENKFGVGIDVAP
AIYARLSKLKGLNLRGVAVHIGSQLQSLDPLEKCYARMGELVAQLRSAGHVITNVDLGGG
LGVPYKPEDNPPSPAEYGAMVARVTRDWDVTLMFEPGRVIAGNSGVMITKVIRIKPGVNS
DFVIVDAAMNDLMRPAIYDAWHDFEAVEPNGETMVASIVGPICESSDIFAKERVVDRVET
DDLGIFRTAGAYGATMANTYNSRPLVPEVLVDGDRYAVVAERIEPATIMAAEHVPDWLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttggaccatttccagctcaaaaatggtatattgcacgcggaagatattccgttgccacaa
atcgcgaaggaggtcgggaccccggtctatgtctattcgcgggcaacgcttgaacgccat
gcgcgggtctttcgcgaggggctgaaagatgccggcaaaatccatctcgctttcgcggtg
aaagcaaaccccaatctggcggttctcagaatattggcaaaccagggctatggtgcggac
gtggtatccggcggcgaattgcagcgtgctctggcggccgggatgaaggcggaagacatt
gttttttccggtgttggcaagagccgcgaggaattgacgctcggtctcgacaagggaatt
ggccagttcaatctggaatcggaagaagaaggcgtgatgctcgcagagatagcggctgcc
cgcggtgagaaggcttcggcaactcttcgcgtcaatcccgatgtagatgcgggaacgcat
gcgaaaatttcgactggcaagaaggaaaataaatttggcgtcgggatcgatgtcgcgcct
gctatctacgcgcgtttgtccaagcttaaagggctgaacctgcgtggcgttgccgtgcac
atcggcagtcagctccagagccttgacccgctcgaaaaatgctatgccagaatgggtgaa
ctggtggcgcagctgcggagtgcaggccatgtcatcaccaatgtcgatttgggcggcgga
ttgggtgtgccgtataagccggaagacaatccgccgagcccggcggaatatggtgccatg
gtcgcgcgggtaactcgggattgggatgtcaccctgatgttcgaacccggccgggtcata
gccgggaatagcggcgtcatgatcaccaaggtcatccggatcaagccgggcgtgaacagc
gatttcgtgattgtcgatgcggcgatgaacgatcttatgcggcccgctatttatgatgcc
tggcatgatttcgaggcggttgaaccgaacggcgagacgatggttgcttcaatcgtcggc
ccgatctgcgaaagcagcgacatttttgccaaggaacgggtcgtcgatcgcgtcgagaca
gacgatctgggaatatttcgcaccgccggcgcctatggggcgacgatggcgaatacttat
aacagccgtcctctggtgcccgaagtgctggttgatggtgatcgatatgcagtggtcgcc
gaacgaatcgaaccggcgactatcatggctgcggaacatgtgcccgactggctgaaataa
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