Sphingorhabdus sp. M41: AZE99_14790
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Entry
AZE99_14790 CDS
T04317
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
sphg
Sphingorhabdus sp. M41
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphg03032
]
AZE99_14790
03036 Chromosome and associated proteins [BR:
sphg03036
]
AZE99_14790
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_14790
DNA replication proteins [BR:
sphg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AZE99_14790
Chromosome and associated proteins [BR:
sphg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AZE99_14790
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AZE99_14790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AMO72948
UniProt:
A0A127MIJ2
LinkDB
All DBs
Position
complement(3101058..3101357)
Genome browser
AA seq
99 aa
AA seq
DB search
MSYTNTLTRADLADTMNRQVGLSRADSAVMVESILDHMIEALVNGENVKISGFGTFVLRD
KGERTGRNPKTGIEVPIAPRRVLTFRASQTMRDRIIAAG
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgagctataccaacaccctgactcgcgctgatcttgcagatacaatgaaccggcaggtt
ggcctttcgcgtgccgatagcgctgtcatggtggaatcgattctggaccatatgatcgag
gcgctggtcaatggggaaaatgtcaagatttcgggattcggaaccttcgtattgcgggac
aagggcgaacgcaccggccgcaatcccaagaccgggattgaagtgcctattgcaccgcgc
cgggtattaaccttccgcgccagccaaacgatgcgtgacaggattatcgccgcaggttaa
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