Spiroplasma phoeniceum: SDAV_0011
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Entry
SDAV_0011 CDS
T06376
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sphh
Spiroplasma phoeniceum
Pathway
sphh03030
DNA replication
sphh03430
Mismatch repair
sphh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SDAV_0011 (holB)
03430 Mismatch repair
SDAV_0011 (holB)
03440 Homologous recombination
SDAV_0011 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphh03032
]
SDAV_0011 (holB)
03400 DNA repair and recombination proteins [BR:
sphh03400
]
SDAV_0011 (holB)
Enzymes [BR:
sphh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SDAV_0011 (holB)
DNA replication proteins [BR:
sphh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SDAV_0011 (holB)
DNA repair and recombination proteins [BR:
sphh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SDAV_0011 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
RRM_PARP14_2
KaiA
Motif
Other DBs
NCBI-ProteinID:
AXF95027
UniProt:
A0A345DLD9
LinkDB
All DBs
Position
12595..13431
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AA seq
278 aa
AA seq
DB search
MDNLFTKNDVEKMTLFKNLILKNNLSNQLLISCNNKVKLEKFTTEVIKFLLCLKKQGEDC
ECDICHRINNKTYYDLKIKGDFETTIKKEAIQEIIQTFNYSALEQTGIKVYVINGIDLLT
LEAANSLLKFLEEPSKNTYAFLLTTNKKNVIDTIKSRCLNIILENTTDLLEVDDFKNEFI
STFFNNFASNSTNNFIHMRQLNNYDSVECRQFFLAIANVLKKKEWEKYQITNQDLIQKLN
HKNSKLIEICYTIANLLLENLNKELILEKGLIDWYNEV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggataatttatttacaaaaaatgatgttgagaaaatgacactatttaaaaatttaatt
ttaaaaaataatttatcaaatcaacttttgatttcttgcaataataaagttaaattagaa
aaatttacaacagaagttattaaatttttattgtgtttaaaaaaacaaggagaagattgt
gaatgtgatatttgtcaccgcattaataataaaacttattatgatttaaaaattaaaggt
gattttgaaacaacaatcaaaaaagaagcaattcaagaaattattcaaacctttaattat
tctgcgttagaacaaacaggaataaaagtatatgttattaatggtattgatttattaaca
ttagaagctgctaattcattattaaaatttttagaagagcctagtaaaaatacatacgct
tttttgttaacaactaataaaaaaaatgttattgatactattaaatcacgttgtttaaat
attattttagaaaatacaactgatttattagaagttgatgattttaaaaatgaatttatt
tctactttttttaacaattttgcaagtaactcgacaaataactttattcatatgcgtcag
ttaaataattatgatagtgttgaatgccgccaattttttttagcaattgctaatgtttta
aaaaagaaagaatgagaaaaatatcaaattacaaatcaagatttaattcaaaaactaaat
cataaaaatagcaagttaattgaaatttgttatactattgccaatttattattggaaaat
ttaaataaagaattaattttagaaaagggattgattgattgatataacgaggtgtaa
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