Spiroplasma phoeniceum: SDAV_002177
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Entry
SDAV_002177 CDS
T06376
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sphh
Spiroplasma phoeniceum
Pathway
sphh00260
Glycine, serine and threonine metabolism
sphh00460
Cyanoamino acid metabolism
sphh00630
Glyoxylate and dicarboxylate metabolism
sphh00670
One carbon pool by folate
sphh00680
Methane metabolism
sphh01100
Metabolic pathways
sphh01110
Biosynthesis of secondary metabolites
sphh01120
Microbial metabolism in diverse environments
sphh01200
Carbon metabolism
sphh01230
Biosynthesis of amino acids
sphh01240
Biosynthesis of cofactors
sphh04981
Folate transport and metabolism
Module
sphh_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sphh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SDAV_002177
09102 Energy metabolism
00680 Methane metabolism
SDAV_002177
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SDAV_002177
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SDAV_002177
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SDAV_002177
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SDAV_002177
Enzymes [BR:
sphh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SDAV_002177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AXF97110
UniProt:
A0A345DSB9
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All DBs
Position
complement(1721834..1723084)
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AA seq
416 aa
AA seq
DB search
MKIMKVNSQIKKLIDLELKRQQNHVELIASENYVSEAILAITGSILTNKYAEGYPFHRYY
GGCEYVDQVEQLAIDKVKELFQAEHANVQPHSGSQANAAAYYALLQPRDTILAMDLAAGG
HLTHGHNVNFSGRLYDFRSYQVDNTTEMLDYNAIEKIAIEVKPKLIVAGASAYSREIDFK
KFRAIADKVGALLIVDMAHIAGLIAAGLHQSPIPYADVVTSTTHKTLRGPRGGLILSKQK
WAKKINSAVFPGNQGGPLEHVIAAKAQCFLEALQPDFKTYQAEIINNAKVLAETLKSNNL
RLVADGTDNHLLMVDVKSSLGISGQMAEEILQKIGIICNKNMIPFDKESSMVTSGIRLGT
AAMTTRGFGSKEFKQIGEIIYNVLKEPTENNIVKYQEEVKNLLSDFPIYLTWKLQE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatgaaagtgaattcacaaattaaaaaattgattgatttggaattaaaacgt
caacaaaatcatgttgaattgattgcgtcagaaaattatgttagtgaggcaattttagct
attacaggctcaattttaactaataagtatgctgaaggatatccatttcaccgatattat
ggaggatgtgaatatgttgatcaagttgaacaattagcaattgataaggttaaggagtta
tttcaagctgaacatgctaatgttcaaccacattcaggtagtcaagcaaatgctgctgct
tattatgctttgctacaaccacgtgatactattttagcaatggatttagcagcaggtggt
cacttaacccatggtcataatgttaatttttctggtcgattatatgattttcgtagttat
caagttgataatacaaccgaaatgttagattataatgcaattgaaaaaattgcaattgaa
gtaaaaccaaaattaattgttgctggagccagtgcctattcacgtgagattgattttaaa
aagttccgtgcaattgctgataaagttggagccttattaatagtagatatggctcatatt
gcaggattaattgccgctggtttacatcaatccccaattccatatgctgatgttgttact
tcgacaacacataaaacattgcgtggacctcgtgggggtttaattttatcaaagcaaaaa
tgagcaaaaaaaattaatagtgctgttttcccaggtaatcaaggtggaccattagaacat
gttattgccgcaaaggcacaatgttttttagaggcattgcaaccagattttaaaacatat
caagcagaaattattaataatgcaaaagtcctagcagaaacattaaaatcaaataatctg
cgtttagtagctgatggaacagacaaccacttattaatggttgatgttaaaagtagttta
ggaatttcggggcaaatggcggaagaaattctacaaaaaattggtattatttgcaacaaa
aatatgattccatttgataaagaatcatcgatggttactagtgggattcggttaggaaca
gcagctatgacaacacgtggttttgggagcaaagaatttaaacaaattggagaaataatt
tataatgttttaaaagaaccaactgaaaataatattgttaaatatcaagaagaagtaaaa
aacttattaagtgattttccaatttacttaacttgaaaattacaagagtaa
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