Entry |
|
Name |
(GenBank) uracil-DNA glycosylase
|
KO |
|
Organism |
sphh Spiroplasma phoeniceum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:sphh00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SDAV_002179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sphh03400]
SDAV_002179
Enzymes [BR:sphh01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SDAV_002179
DNA repair and recombination proteins [BR:sphh03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SDAV_002179
Prokaryotic type
SDAV_002179
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1724187..1724849)
|
AA seq |
220 aa
MWIKYAVGWGEFFDNEIKKPYFKQLLKNIDSEYQNKLCYPAKTDIFRLFTLIEPNDIKVV
IIGQDPYHGPGQANGLAFSVNDGIKTPPSLVNIFHELKKDLGVDHYASGNLDHWAKKGVF
LYNTIGSVVAKTPLSHKDIGWTNFSQNLIIYLNEIRNDIVYVLWGNYAKQYGKYILNKIN
IIKGAHPSPFSYNLFKDQQFFVKINDLLLKNKKNIIDWKM |
NT seq |
663 nt +upstreamnt +downstreamnt
atgtgaataaaatatgcagttggttgaggagagttctttgataatgagattaaaaaacct
tattttaaacaattgttaaagaacattgatagtgaatatcaaaataaactttgttaccct
gcaaaaacagatatttttcgtttgtttacattaattgagcctaatgatattaaagttgtt
attattggacaagatccatatcatggtccaggccaagcaaatggtttagcttttagtgtt
aatgatggtattaaaactccgccaagtttagtcaatatttttcatgaattaaaaaaagac
ttaggtgttgatcattatgctagtggtaatttagaccattgagctaaaaaaggtgttttt
ctatataatacaattggaagtgttgttgccaaaacgcctttaagtcataaggatattggt
tgaactaattttagtcaaaatttgattatttatttaaatgagattcgtaatgatattgta
tatgttttatgaggcaattatgcaaaacagtatggtaaatatattttgaataaaattaat
attattaagggggcacacccatcaccttttagttacaatttatttaaggatcaacaattt
tttgtaaaaattaacgatttacttttaaaaaataaaaaaaacataattgattgaaaaatg
taa |