Spiroplasma phoeniceum: SDAV_00853
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Entry
SDAV_00853 CDS
T06376
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sphh
Spiroplasma phoeniceum
Brite
KEGG Orthology (KO) [BR:
sphh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphh03016
]
SDAV_00853
Enzymes [BR:
sphh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SDAV_00853
Transfer RNA biogenesis [BR:
sphh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SDAV_00853
Prokaryotic type
SDAV_00853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Tenui_NS4
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AXF95836
UniProt:
A0A345DNP8
LinkDB
All DBs
Position
complement(641993..642733)
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AA seq
246 aa
AA seq
DB search
MLYLLLSIEYDGYDYSGWVKQKNARTIQGELEKAFFGICHQKIWTLGASKTDAGVHACDQ
KVLVKLTFQPLHLAFFIKTVSQTLPPNINIKGYQFVAENFSVRTAKVKEYVYTINDQEYD
LFNHRYELKVNAPLNVKKLHQISQIFVGTHDFAYFAGVKPTEDIATVRTINKIWVKRNKA
KKIEINFRGKIFIRYQIRMLTQNILACYAGKVSLTELKAQLNCPPKGATTKYCAKPYGLC
LKKIKY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgttatatttattattaagtattgaatatgatggttatgattatagtggctgagttaaa
caaaaaaatgctcgaacaattcaaggtgaattggaaaaagcattttttggtatttgtcat
caaaaaatttgaactttaggagctagtaaaacggatgctggtgtgcacgcttgtgatcaa
aaggtattagtaaaactaacattccaaccactacatttagctttttttattaaaaccgtt
agtcaaactttaccaccaaatattaatattaaaggatatcagtttgtagctgaaaatttt
agtgttcgaactgcaaaagtaaaagaatatgtttatacaattaatgatcaagagtatgat
ctttttaaccaccgttatgaacttaaagttaatgcaccattaaatgttaaaaagttacat
caaattagtcaaatttttgttggaacacacgattttgcttattttgcaggggttaaacca
accgaagatattgcaacagtacggacaattaacaaaatttgggttaaacgaaacaaagca
aaaaaaattgaaattaattttagggggaaaatttttattcgttatcaaattcgcatgttg
acacaaaatattttagcttgttatgctggcaaagttagtttaactgaactaaaagcacaa
ttaaactgcccgcctaaaggagcaacaacaaaatattgtgcaaaaccatatggtttatgt
ttgaaaaaaattaaatattaa
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