KEGG   Sphingomonas hengshuiensis: TS85_01855
Entry
TS85_01855        CDS       T03848                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
sphi  Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:sphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sphi03016]
    TS85_01855
Enzymes [BR:sphi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     TS85_01855
Transfer RNA biogenesis [BR:sphi03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    TS85_01855
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AJP70829
UniProt: A0A7U5HVK8
LinkDB
Position
complement(406996..407616)
AA seq 206 aa
MTVYFHEEDLPEGVFAPGASIAVDTETMGLITPRDRLCVVQLSDGSGDEHLVRFGSHSAY
DAPNLRAVLSDPERLKLYHFARFDLAAIRFYLGVIAAPVYCTKIASRLVRTYTDRHGLKD
LARELVGAEISKQQQSSDWGGPDLSDAQKDYAASDVRYLHAMKVELDKRLEREGRMPLAE
ACFDFLPWRAELDLAGWPDTDIFAHI
NT seq 621 nt   +upstreamnt  +downstreamnt
atgaccgtgtacttccatgaagaggacctgcccgagggcgtattcgcccccggcgcatcg
atcgccgtcgataccgagacgatggggctcatcaccccgcgcgaccggctgtgcgtcgtc
cagctttccgatggctcgggggacgagcatctggtccgcttcggatcgcattccgcctat
gacgcgccgaatctccgcgcggtgctgagcgatcccgagcggctcaaactctatcatttc
gcgcgattcgatcttgccgcgatccgcttctacctcggcgtgatcgcggcgccggtctat
tgcaccaagatcgcgtcgcggctggtgcgcacctataccgatcgccacgggttgaaggac
ctggcgcgcgagctggtcggtgccgagatctcgaagcagcagcaatcctcggactggggc
ggccccgatctttcggacgcgcaaaaggattatgccgcgtcggacgtccgctatcttcat
gcgatgaaagtggaactcgacaagcgtctcgagcgtgaagggcgcatgccgctcgccgaa
gcctgtttcgatttcctgccctggcgcgccgagctcgatctggccggctggccggacacg
gacatttttgcgcatatctga

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