Sphingomonas hengshuiensis: TS85_01855
Help
Entry
TS85_01855 CDS
T03848
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphi03016
]
TS85_01855
Enzymes [BR:
sphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TS85_01855
Transfer RNA biogenesis [BR:
sphi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TS85_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJP70829
UniProt:
A0A7U5HVK8
LinkDB
All DBs
Position
complement(406996..407616)
Genome browser
AA seq
206 aa
AA seq
DB search
MTVYFHEEDLPEGVFAPGASIAVDTETMGLITPRDRLCVVQLSDGSGDEHLVRFGSHSAY
DAPNLRAVLSDPERLKLYHFARFDLAAIRFYLGVIAAPVYCTKIASRLVRTYTDRHGLKD
LARELVGAEISKQQQSSDWGGPDLSDAQKDYAASDVRYLHAMKVELDKRLEREGRMPLAE
ACFDFLPWRAELDLAGWPDTDIFAHI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgtacttccatgaagaggacctgcccgagggcgtattcgcccccggcgcatcg
atcgccgtcgataccgagacgatggggctcatcaccccgcgcgaccggctgtgcgtcgtc
cagctttccgatggctcgggggacgagcatctggtccgcttcggatcgcattccgcctat
gacgcgccgaatctccgcgcggtgctgagcgatcccgagcggctcaaactctatcatttc
gcgcgattcgatcttgccgcgatccgcttctacctcggcgtgatcgcggcgccggtctat
tgcaccaagatcgcgtcgcggctggtgcgcacctataccgatcgccacgggttgaaggac
ctggcgcgcgagctggtcggtgccgagatctcgaagcagcagcaatcctcggactggggc
ggccccgatctttcggacgcgcaaaaggattatgccgcgtcggacgtccgctatcttcat
gcgatgaaagtggaactcgacaagcgtctcgagcgtgaagggcgcatgccgctcgccgaa
gcctgtttcgatttcctgccctggcgcgccgagctcgatctggccggctggccggacacg
gacatttttgcgcatatctga
DBGET
integrated database retrieval system