Sphingomonas hengshuiensis: TS85_02760
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Entry
TS85_02760 CDS
T03848
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphi03032
]
TS85_02760
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_02760
Enzymes [BR:
sphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TS85_02760
DNA replication proteins [BR:
sphi03032
]
Prokaryotic type
DNA Topoisomerases
TS85_02760
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TS85_02760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AJP70977
UniProt:
A0A7U5BEU8
LinkDB
All DBs
Position
complement(583814..584845)
Genome browser
AA seq
343 aa
AA seq
DB search
MANDDIVYVEIRQDGQKTGITRRKMRHGWGYWDASGARITDRDEIDRLNRIGLPPAYRDA
WFCPDPNGHIQAVGWDDKGRKQYRYHTGFREAQEAAKYDRCGAFGRRLPRLRARVEQDLK
RRGLCKDKAVAAVVRLLDLGTIRVGNESYAQANKSFGATTLRKRHATVTGRALKLQFRAK
SGKLRVMTITDGTLSRFVKRCQDLPGQHLFRWLDDAGESHPVTSSDVNCYIREATGDAFS
AKHFRTWGASVLAFEALACAEGYVGIKAMLEPVTAALGNTPSIARKSYVHPLLVALAKDK
GAQAAFREGLRLPRTTRYLSRFERGLIAFLDDETAHAPQAKAA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgacgacatcgtctatgtcgagattcgacaggacgggcaaaaaaccgggatc
acccgccgcaagatgcgccatggctggggctattgggatgcgtcgggggcgcggatcacc
gaccgcgacgagatcgaccggctcaatcgcatcgggctgccgcctgcgtatcgcgacgca
tggttctgccccgatcccaatgggcatatccaggcggtcggctgggacgacaaggggcgc
aagcaatatcgctaccacaccggctttcgcgaggcgcaggaggcggccaagtacgatcgt
tgcggcgcattcggccgccgcctgccgcggctgcgcgcccgcgtcgaacaggatttgaaa
cgccgcgggctgtgcaaggacaaggccgtcgccgcggtcgtccggctgctcgatctcggc
acgatccgcgtggggaacgaaagctatgcgcaggcgaacaagagcttcggcgcgacgacg
ctgcgcaagcgccacgccaccgtcacggggcgcgcgctcaagctccagttccgcgccaaa
tcgggcaaactgcgcgtcatgacgatcaccgacggcacgctcagccgcttcgtcaaacgc
tgccaggacctgcccggccagcatctgttccgctggctcgacgacgcgggcgagagccac
cccgtcacctcgtccgacgtcaattgctatatccgcgaggcgaccggcgacgccttctcc
gcgaagcatttccgcacctggggcgcgagcgtgctggcgttcgaggcgctggcctgtgcc
gagggctatgtcgggatcaaggcgatgctggagcccgtgaccgccgcgctgggcaacacg
ccgtcgatcgcgcgcaaatcctatgtccatccgctgctggtggcgctggccaaggacaag
ggggcacaggcggcgttccgcgaagggttgcggctaccgcgcaccacgcggtacctgagc
cgcttcgaacgcgggttgatcgcgtttctggacgacgagacggcccacgcgccgcaagca
aaggcagcctga
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