Sphingomonas hengshuiensis: TS85_04715
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Entry
TS85_04715 CDS
T03848
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphi01002
]
TS85_04715
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphi01011
]
TS85_04715
Peptidases and inhibitors [BR:
sphi01002
]
Cysteine peptidases
Family C82
TS85_04715
Peptidoglycan biosynthesis and degradation proteins [BR:
sphi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TS85_04715
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJP74263
UniProt:
A0A7U5BFE3
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All DBs
Position
complement(1062849..1064258)
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AA seq
469 aa
AA seq
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MWPTAALALATTQQTGGRAEAGGWDGASRSALASALADRARHGLDRVSFAKIQDGASGEV
LRAAALRYARALAQGMVDPTTLHDPFTLPQGKPDLEPALAEALASGKLGEWLASLAPQDD
EYARLSQAYLDLRAQPQDSGAAQIGAGLLTVGDADARVSAIVEQLIMGEYLPADAALADN
ASPEGALPIYTQQIAAAVKALQRDYGIAADGIIGPDTLGVLNLGAGDRARAVAVALERRR
WLERTPPATRIDVNTAAAQLSYYRDGVLVDTRRVVVGKPGTETPPLQSPIYRLVANPTWT
VPKSIQNGELAHVGADYLQRHNMELRDGWIVQRSGPDNALGLVKFDMQNEHAIYLHDTAA
PELFERSHRHRSHGCVRVEDALGFAQLLADDQKISEAWQAAQAGGEQQFVPLKTPIPVRL
LYRNVFVDQDGKVAFRTDPYGWNTPIAKALGFSYPGKARLRSEDADIGP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atctggcctaccgcagcgctggcgctcgctacgacacagcaaacaggcgggcgggcggaa
gcaggtggttgggacggcgcgtcaaggtcggccctcgcctcggcgcttgccgatcgcgcg
cgccacgggctcgatcgcgtcagcttcgcgaaaatccaggacggagcatccggcgaggtg
cttcgcgcggccgcgcttcgctatgcccgggcgctggcgcaagggatggtcgatccgacg
acattgcatgatccgttcacgctgccgcagggcaagcccgatctcgagccggcattggcc
gaagcattagccagcggcaagctgggcgaatggctggcaagtctggcgccgcaggacgac
gaatatgcccggctttcccaagcctatctcgatcttcgcgcgcaaccgcaggacagcggc
gcagcgcagatcggcgcggggttgctcactgtcggcgatgccgacgcgcgcgtgtcggcc
atcgtcgagcagctcatcatgggcgagtatcttccagccgatgccgcgttggcggacaac
gcttcccccgaaggcgcactcccgatctatacccagcagatcgccgctgcggtcaaggcg
cttcagcgggactacgggatcgccgccgatggcataatcggtccggatacgctgggtgtc
ctcaatctcggggccggcgaccgtgcgcgggcggttgcggtcgcgctggagcgcaggcgg
tggctcgagcgcacgcccccggcgacacggatcgacgtcaacactgccgcagcgcagctg
tcctattatcgcgacggcgtccttgtcgatacgcggcgcgtggtcgtcggcaagcccggc
accgagacgccgccgctccaatcgccgatctatcgcctcgtcgccaacccgacctggacg
gtcccaaaatcgatccagaacggcgagctggcccatgtcggcgcggactatctgcaacgc
cacaacatggaactgagggacggctggatcgtccagcgatcggggccggacaatgcgctg
gggctggtcaagttcgacatgcagaatgaacatgccatctatctgcacgacaccgccgcg
ccggagctgttcgagcgcagccatcgtcatcgcagccatggctgcgtgcgtgtggaggac
gcgcttggctttgcgcaactcttggctgacgaccaaaagatatccgaagcatggcaagcg
gcgcaggccggtggcgagcagcagttcgtccctttgaaaacgccaattccggtccgcctg
ctctaccgcaatgtgttcgtcgatcaggacggcaaggtcgcctttcgcaccgatccttat
gggtggaataccccgatcgccaaggcgctcggcttttcgtatcccggcaaggctcgactg
cgcagcgaagacgccgatatcggtccatga
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