Entry |
|
Name |
(GenBank) pseudouridine synthase
|
KO |
|
Organism |
sphi Sphingomonas hengshuiensis
|
Brite |
KEGG Orthology (KO) [BR:sphi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:sphi03016]
TS85_06155
Enzymes [BR:sphi01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TS85_06155
Transfer RNA biogenesis [BR:sphi03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TS85_06155
Prokaryotic type
TS85_06155
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1406994..1407734)
|
AA seq |
246 aa
MTRFALTVEYDGRPFMGWQRQDHGPSVQQAIEDAAFAVTGERVAVHAAGRTDAGVHGLGM
RAHLDIAKDIAPFRLMEALNARVRPHPVAILDCVAVADDWHARFSCVARHYEYRIVQRRA
PLTWERGLAWRIAADLDAEAMHAAAQILVGRHDFTTFRSAHCQADSPLRTLDRLDVARSG
DRVVVLASARSFLHHQVRSMVGCLALVGQGKWSAADLRAALGARDRAALGLNAPSDGLYF
VRADYP |
NT seq |
741 nt +upstreamnt +downstreamnt
ttgacgcggttcgcgctcaccgtggaatatgacgggcggcccttcatggggtggcagcgg
caggaccatggcccgagcgtgcaacaggcgatcgaggatgcggcgtttgccgtgaccggc
gagcgcgtcgcggtccatgcagccgggcgtaccgatgccggggtgcatgggctggggatg
cgcgcgcatctcgacattgcgaaggacatcgcgccattccggctgatggaggcattgaac
gcgcgggtgcggccgcatccggtcgcgatcctggactgcgttgcggtggcggacgactgg
catgcgcgcttttcgtgcgtggcgcggcattacgagtaccgaatcgtccagcgccgcgcg
ccgctgacctgggagcgcgggctggcatggcggatcgccgccgatctggacgcagaggcg
atgcatgcggcggcgcagatactggtggggcggcacgacttcacgacgttccgctcggcg
cattgccaggcggacagccccttgcggacgctcgaccggctggacgtggcgcgcagcggg
gatcgcgtggtggtgctggcgtcggcgcggtcgttccttcaccatcaggtgcgctcgatg
gtcgggtgcctcgcgctggtggggcaagggaaatggtcggctgcggacctgcgtgctgcg
ctgggggcgcgggaccgggcggcgttggggctgaatgcgccttcggatgggctgtatttc
gtgcgggcggattatccatga |