Sphingomonas hengshuiensis: TS85_06205
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Entry
TS85_06205 CDS
T03848
Name
(GenBank) nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphi03019
]
TS85_06205
Messenger RNA biogenesis [BR:
sphi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TS85_06205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_16
AAA_33
Rad17
PRK
AAA_29
ABC_tran
AAA_28
ZSWIM1-3_C
T2SSE
AAA_27
CoaE
Zeta_toxin
cobW
AAA_30
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AJP71451
UniProt:
A0A7U4J731
LinkDB
All DBs
Position
complement(1414746..1415684)
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AA seq
312 aa
AA seq
DB search
MSGRKPKNILLVTGMSGAGKSTVLRTLEDLGWEVVDNLPLILLNRLLDTDPGEGDDSDSD
RPLALGIGTQTRGFDAESIVRRIKKLREDYRHDIGTLFLECSGAELQRRYAETRRRHPLE
QDRPAADGIARERELLNPLRRWSNRLIDTTTLSANDLQQQIRATFAGETPRAAVLTILSF
GYSRGLPRDADLVFDMRFLRNPHWDESLRPGTGQDPDVAAYVAADSAYPAAMAQIEALLL
LLLPRYQAEGKAYVTVAFGCTGGRHRSVHVAERMSRRLREEGFSPTVLHRDLKTAPQDSL
EGTPVTTRRGGV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcgcaagcccaagaacatcctgctcgtcaccggcatgtccggggcgggcaaa
tcgaccgtgctccgcacgctggaagatctgggctgggaagtcgtcgacaatctgccgctg
atcctgctcaaccgcctgctcgataccgatcccggcgaaggcgacgacagcgacagcgac
cgcccgctggcgctgggcatcggcacccagacccgcggcttcgacgccgagagcatcgtc
cggcggatcaagaagctgcgcgaggattatcgccacgatatcggcacgctgttcctcgaa
tgctcgggcgccgagttgcagcggcgctatgccgagacgcggcggcggcacccgctcgaa
caggaccgcccggcggcggacggcattgcccgcgagcgtgaattgctcaacccgctgcgg
cgctggtcgaaccggctgatcgacaccaccacgctctccgccaacgacctccagcagcag
atccgcgcgacctttgccggcgagacgccgcgcgccgcggtgctgacgatcctgtccttc
ggctattcccgcgggctgccgcgcgacgccgacctcgtgttcgacatgcggttcctccgc
aacccgcattgggacgagtcgctgcgccccgggaccggccaggaccccgacgtcgccgcc
tatgtcgcggcggactcggcctatccggcggcgatggcgcagatcgaggcactgctgctc
ctcctgctgccgcgctatcaggcggagggcaaagcctatgtcacggtcgcctttggatgc
accggggggcggcaccggtcggtgcatgttgcggagcgtatgtcccgcaggttgcgcgaa
gagggattttcgcccacggtgctgcaccgcgatttgaagaccgcgccgcaggactcgctg
gaggggacgccggtgaccacaagaaggggcggagtttga
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