Sphingomonas hengshuiensis: TS85_06885
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Entry
TS85_06885 CDS
T03848
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphi03009
]
TS85_06885
Enzymes [BR:
sphi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
TS85_06885
Ribosome biogenesis [BR:
sphi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TS85_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AJP71566
UniProt:
A0A7U4J7A7
LinkDB
All DBs
Position
complement(1560133..1561653)
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AA seq
506 aa
AA seq
DB search
MSPTSPPETQRIAKLLARAGIASRREIERMIAEGRIALNGVPLDTPATLLASLDGVTVDG
DPVAAPAPARLFRYHKPAGLLTAERDFTGRPTIYDNLPPGLPRVMPVGRLDLNTEGLLLL
TTDGELKRALELPSVGVERSYRARAYGQVSQEQLEDLMLGIEIEGVRYGSINANIERRTG
ANLWIEMTLTEGKNREVRRVLEHLGLQVSRLIRTRYGPFYLGDLPPGDVDEIRQSDLTTF
RTVLAKPGGGKAASNLQFSVRARVAEPRPRADSDAPQRARANAVEPERPRSRPAAPAAPR
PRPAPVAERPREEGPPPGAARGRGRTLPPGTERPPRDSERPRRDAPQPRRDADQPRRDAP
QPRRDAPGPGVRARPVRPGDDRPRRDGPAAAPRTRPDQREAARPERTPRAPQFTPRQTPG
AKPYAPRETAGDVAKPARAARARAHRDTLEPRAGEIADRPRTTRPPRSGPPGTGPKPKPG
GKPRSGGPADGRGRPARPPRPTRTRK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccaaccagcccccccgaaacccagcgcatcgcaaagctgctcgcccgtgccgga
atcgcgtcgcgtcgtgagatcgagcgcatgattgccgaggggcgtatcgccctgaacggc
gtccctctagataccccggcgacgttgctggcctcgctcgacggcgtgaccgtcgacggc
gatccggtcgcggccccggccccggcccggctgttccgctatcacaagcccgccgggctg
ctgacggcggagcgcgactttaccgggcgcccgacgatctacgacaatctgccgccgggc
ctcccgcgcgtcatgcccgtcggccggctcgacctgaacaccgaggggctgttgctcctc
accaccgatggcgagctgaagcgcgcgctcgaactgccctcggtcggagtcgagcgcagc
tatcgcgcccgcgcttacggccaggtcagccaggagcagctcgaagacctgatgctcggc
atcgagatcgagggcgtgcgctacggatcgatcaacgccaatatcgaacggcgcacgggc
gcgaacctgtggatcgaaatgacgctgaccgagggcaagaaccgcgaagtgcggcgcgtg
ctcgaacatctcgggctccaggtcagccggctgatccgcacccgctatggccccttctac
ctgggcgacctgccgccgggcgatgtcgacgagatccgccagagcgacctcaccaccttc
cgcaccgtgctggcgaagccgggcggcggcaaggcggcgtcgaacctgcaattctcggtc
cgtgcccgcgtggccgagccgcgcccacgtgccgactccgacgcgccgcagcgcgcccgc
gccaatgccgtcgagcccgagcgtccgcgctcgcggcctgcggcacccgccgccccgcgc
ccccgccccgcacccgtggccgagcgtcctcgggaggaaggcccgccccccggcgccgcg
cgcgggcgtggccgcaccctgccgccaggaaccgaacggcctccccgcgacagcgaacgg
ccccgccgtgatgcgccccagccccgcagggacgccgatcagcctcgccgggacgcgcca
cagcctcgccgcgacgcccctggccccggcgtccgcgcgcgcccggttcggcctggggat
gatcgcccgcgccgcgacggccccgccgccgcgccccgcacccggcccgaccagcgcgag
gcggcgcgtcccgagcgtacgccccgcgcgccgcagttcacgccgcgccagacccccggc
gccaagccctatgccccgcgcgagaccgccggcgacgtcgccaagcccgcccgcgctgcc
cgcgcccgcgcgcaccgcgatacgctggagccgcgcgccggcgagatcgccgatcgtccg
cgcacgacgcgtcccccgcgaagcggtccgcccggcaccggccccaagccgaaacccggc
ggcaagccgcgcagcggcggtcccgccgatggtcgcgggcgccccgcgcgtcctccccgc
ccaacccggacccgtaaataa
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