Sphingomonas hengshuiensis: TS85_08020
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Entry
TS85_08020 CDS
T03848
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphi01002
]
TS85_08020
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphi01011
]
TS85_08020
Peptidases and inhibitors [BR:
sphi01002
]
Cysteine peptidases
Family C82
TS85_08020
Peptidoglycan biosynthesis and degradation proteins [BR:
sphi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TS85_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
TraI_2_C
Motif
Other DBs
NCBI-ProteinID:
AJP71743
UniProt:
A0A7U4LEZ6
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All DBs
Position
1809557..1811029
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AA seq
490 aa
AA seq
DB search
MTVQRNLGSTIRRGAAWAAMAGLVATPGLAQQVPAPTIQAVPLAPPVQVVPFPVLSAAQA
ATLGQMIADAGYAHGLRHDADRPVIPQNNDALVRAALDFARAVHSGRLDISDFQQDWGLR
PAPYDPLPGFADAVKRDRIAAWIRALPPPYAGYDTLQKGLARYRAIEADGGWSSVPAGPD
LTIGATGARVAALRKRLAVEDDAVSEGTKFDADLLAAVKRAQGRYGLNPTGVVSTQTLGA
LNVPAADRVRQIMANMERWRWLPQELPAKRIQVNIADARLAVFEGDAPIASMKAVTGRPG
NETPMLQSKIHSIVLNPPWNVPTSIATKELWPKGAAYLARNNYKVIGTGANKRLQQQPGP
RSALGLYKFDFDNPYAVYLHDTPSQSTFASFSRLASHGCVRLEKPAALAQLLLRNDPAWQ
PEQIQAALAAGKTLRVPLQEQDKVSVYLLYWTAFANRDGVVSFRADPYGWDKTLAAKIEN
RSAITAVAAR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtgcaacgcaatctgggctcgacgatccgccggggtgccgcctgggcagcgatg
gccgggctggtcgcgacgccgggtctcgcgcaacaggtgcccgcgccgacgatccaggcg
gttccgttggcgccgccggtgcaggtcgtccccttccccgtgctgagcgccgcgcaggcg
gcgacgctggggcagatgatcgccgatgccggctatgcccatggcctgcgccacgatgcc
gatcgtccggtgatcccgcagaataacgacgcgctggtccgcgctgcgctcgatttcgcg
cgcgcggtgcattcggggcggctcgacatcagcgacttccagcaggattgggggctgcgt
cccgcgccctatgacccgctccccggctttgccgacgccgtgaagcgcgatcggatcgcg
gcatggatccgcgcgctgcccccaccctatgccggctatgacacgctgcaaaaggggctg
gcgcgttatcgggcgatcgaggcggacggcggctggagcagcgttccggctgggcccgac
ctgacgatcggcgcgaccggcgcgcgcgtcgcggcgctgcgcaagcggctcgcggtcgag
gatgatgcggtgtccgaggggaccaagttcgacgccgacctcctggcggctgtgaagcgc
gcgcaggggcgctatggcctcaacccgacgggcgtggtgtccacccagacgctgggcgcg
ctcaacgtgcccgccgccgaccgcgttcgccagatcatggccaacatggagcgctggcgc
tggctgccgcaggaactccccgccaagcgtatccaggtcaacatcgccgatgcgcggctc
gcggtgttcgaaggcgacgcgccgatcgcgtcgatgaaggcggttaccgggcgtcccggc
aacgaaaccccgatgctccagtcgaaaatccattcgatcgtgctcaatccgccctggaac
gtgcccaccagcatcgccaccaaggagctgtggcccaagggcgcggcgtatctcgcgcgc
aacaattacaaggtgatcggcaccggcgctaacaaacgcttgcaacaacagccggggccg
cgcagcgcgctggggctgtacaagttcgacttcgacaatccctatgcggtgtatctgcac
gacaccccgtcgcaatcgaccttcgcgagcttcagccggctggcgagccatggctgcgtc
cggctggaaaagcccgccgcgcttgcccagttgctgttgcgcaacgatcccgcatggcaa
cccgagcagatccaggcggcattggcggcgggaaagacgctgcgcgtgccgttgcaggaa
caggataaggtctcggtgtatttgctctactggacggcgttcgcaaaccgcgacggcgtg
gtgagcttccgcgcagacccctatggctgggacaagacgctcgccgccaagatcgagaac
cgttcggcgatcaccgccgtcgccgcccgttga
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