Sphingomonas hengshuiensis: TS85_08755
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Entry
TS85_08755 CDS
T03848
Name
(GenBank) helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_08755
Enzymes [BR:
sphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TS85_08755
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TS85_08755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJP71852
UniProt:
A0A7U4J7T7
LinkDB
All DBs
Position
complement(2000719..2003655)
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AA seq
978 aa
AA seq
DB search
MSIVPRSLHLYTIPPHRAFADALAIGLIRRFGGDPLKLARGLVLVPNNRAKRAIQEAFVR
ASGGGLLLPRLVAVGDPELDEAVFDAASEAPVPPAIDPLQRRMILARLIQAAGAPVDAAE
AVRLAGELATTFDQLLVEEVAPHTLHTIEIAQELSAHWERSLALFDAVLDAWPAELERLG
RIDMVERRIRLIDRLERRWRATPPGGFVCAAGVTGSAPAIARLLRAVAELPQGMVVLPGL
STAISDAEWDLLGPHAPDPVSGRRRRNIESHPQFHLKLLLERMGVHRSEFDPWRVASDHD
APPARSKAIASAMAPPELTHGWTALPAAERRLDGVRALEVATPAEEAQAIALALREALET
PGRTAALVTPDRVLARRVAAHCARWGLVIDDSAGQPLSMLPPGTLLLAIADAAAQGFAPL
PLLTLLKHPLVMPDARLAWLEGARTLDRALRGPRPAPGLAGVDRHLAEQDGREGHLRAAA
ERWWPTARALLAPLEALFAGGPAPLPALVAALREAAQALGGDALWSRADGRAAADLLDAL
EREAVHGPALAEPEALAPLLRTLMAETAVRPPQGGHPRLAILGLLEARLQTADLMILGGL
NEGVWPGLPAPDPWLAPRIRAELGLPGLERRIGLSAHDLASALGAKQVLLTRARRDASAP
TIASRFWLRLEALSGGLERAGELAAWLRAIDDGGVAEPAPRPAPAPPVAARPKALSVTEV
DRLKADPYAFYARRMLRLMPLDPVDADPSAAWRGTAVHAVLQRWFELDGCAPEKLRARAE
AMLVDEPTHPMMRALWQPRLMEAIDWIAAQIAADPSRKVIAVETRGVIPFAGVELSGTFD
RIDRLADGSLAIVDYKTGKPPSLAAVREGFSLQLGLLGLIAERGGFEGVEGRASAFEYWS
LSRNPRGGFGYVESPCDTRRRDYLPADDFVDAAVAQFEGAARMWLTGDEPFTAKLHPDYA
PYAEYDQLMRRDEWYGRD
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagtgcccaggtcgctccacctctacaccatccccccgcatcgcgcctttgcc
gacgcgctggcgatcgggttgatccggcggttcgggggcgatccgctgaagctggcgcgc
gggttggtgctggtgcccaataatcgcgccaagcgggcgattcaggaggcgttcgtgcgg
gccagcggcggcgggctgttactgccccggctggtcgcggtgggcgatcccgaattggac
gaggcggtgttcgatgccgcgagcgaggcgccggtgccgcccgcgatcgatccgctccag
cgacggatgatcctcgcgcggctgatccaggcggcgggggcgccggtggatgcggcggag
gcggtgcggctggcgggcgaactggcgacgacgttcgaccagttgctggtcgaggaggtt
gccccgcacacccttcataccattgaaattgcacaagaattatccgcgcattgggagcgg
tcgctggcgctgttcgatgcggtgctcgacgcatggcccgccgagctggagcggctgggg
cggatcgacatggtcgagcggcgtatccgcctgatcgaccggctcgagcgacgctggcgc
gccaccccacctggcgggttcgtctgcgcggcgggggtcaccggatcggcgcccgcgatt
gcgcggctgctgcgcgcggtggcggagctgccgcaggggatggtcgtgctccccgggctg
tcgaccgcgatcagcgatgccgaatgggatttgctcggcccgcacgcccccgatccggtc
agcggtcggcggcggcgcaatatcgagagccatccgcaattccacctcaagctgctgctg
gagcggatgggcgtccaccgcagcgagttcgacccgtggcgcgtcgccagcgaccatgac
gccccgcctgcgcgcagcaaggcgattgcctccgcgatggcgccgcccgagctgacgcat
ggctggaccgcgctgcccgccgccgagcggcggctggacggggtgcgcgcgctcgaagtc
gcgaccccggcggaggaggcgcaggcgattgcgctggcgctgcgcgaggcgctggagacg
ccggggcggactgcggcgctggtgactccagaccgcgtgctcgcgcggcgggtggcggcg
cattgcgcgcgctgggggctggtgatcgacgattcggcggggcagccgctatcgatgctg
ccgccgggcacgctgctgctcgccatcgccgatgccgccgcgcagggctttgcgccgctg
ccgctgctgacgttgctcaagcatccgctggtgatgcccgacgctcggctcgcgtggctg
gagggtgcgcgcacgctcgaccgcgcgctgcgtgggccgcgccccgcgccggggttggcc
ggagtcgaccgtcatctggccgagcaggacgggcgcgaggggcatttgcgcgccgccgcc
gagcgctggtggccgaccgcgcgcgcgctgctggcgccgctggaggcgctgttcgcgggt
gggcccgcaccgctgcccgcgctggtggcggcgctgcgcgaggcggcgcaggcattgggc
ggcgatgcgctgtggagccgggccgatggccgcgcggcggcggacctgctcgacgcgctg
gagcgcgaggcggtgcatggcccggcgctggccgagcccgaggcgctggcgccgctgctg
cgcacgctgatggccgagacggcggtgcgcccgccacagggggggcacccccggctggcg
atattggggctgctcgaggcgcggttgcagaccgccgacctgatgatcctgggcgggctc
aacgaaggcgtatggccggggctgcccgcgcccgatccgtggctcgcgccgcgcatccgc
gccgaactggggctgccggggctggagcggcggatcgggctttcggcgcatgatctggcg
agtgcgctgggtgcgaagcaggtgctgctgacccgcgcccgacgcgacgcgagcgcgccg
acgattgcctcgcgcttctggctgcggctggaggcattgtcgggggggctggagcgcgcg
ggcgaactggccgcatggctgcgcgcgatcgacgatggcggcgtcgctgaacctgccccg
cgccccgcgcccgcgcccccggtggcggcgcggcccaaggcgctgtcggtgacagaggtc
gaccggctcaaggccgatccttacgccttttacgcccgccggatgctgcggctgatgccg
ctcgaccccgtggacgccgatcccagcgcggcgtggcgcgggacggcggtccatgcggtg
ctccagcgctggttcgagctggacggctgcgcgcccgaaaagctgcgtgcccgtgccgag
gcgatgctggtcgatgagcccacccacccgatgatgcgcgcgctgtggcagccgcgattg
atggaggcgatcgactggatcgccgcgcagatcgccgccgatccttcgcgcaaggttatt
gcggtcgagacgcgcggggtgatcccgtttgcaggggtcgagctgagcgggacgttcgac
cgtatcgaccggctggcggacggcagcctggcgatcgtcgactacaagaccggcaagccg
ccgagcctggcagcggtgcgcgaggggttcagcctccagctcgggctgctcgggctgatc
gccgagcgcggcgggttcgagggggtcgaagggcgggcgagcgcgttcgaatattggtcg
ctgtcgcgcaacccgcgcggcggatttggctatgtcgagagtccgtgcgacacgcggcgg
cgcgattacctgcccgccgacgatttcgtcgatgcggcggtcgcgcagttcgagggtgcg
gcgcggatgtggctgacgggggacgaacccttcaccgccaagctccaccccgattatgcg
ccctatgccgagtatgaccagctgatgcgccgcgacgaatggtatggccgtgactga
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