| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
sphi Sphingomonas hengshuiensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sphi00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TS85_10550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sphi03021]
TS85_10550
03400 DNA repair and recombination proteins [BR:sphi03400]
TS85_10550
Enzymes [BR:sphi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TS85_10550
Transcription machinery [BR:sphi03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TS85_10550
DNA repair and recombination proteins [BR:sphi03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TS85_10550
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2412370..2416527
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| AA seq |
1385 aa
MATKAIDGTGTLKRRIRKVFGDIHEVVQMPNLIEVQRESYEQFLRSDPSIGYVSGLEKTL
RSVFPIRDFAGTAELDFVNYELEPPKFDVEECRQRGITYAAPMRVTLRLIVFEVDPDTEA
RSVLDIKEQDVYMGDMPLMTGNGTFFINGTERVIVSQMHRSPGVLFDHDRGKTHASGKYL
FAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTTLLYALGLNSEDILNYFYNRVTYV
RGPNGWQIPFQAENWRGQKPMYDIVDALSGEIVFASGQKISPRAANKAAKDGLTTLLIPT
EEIFGRYSAFDLINEATGEIYIEAGDEVSAENLEMLDKAGIDQLELLDIDHIATGPWIRN
TLKVDKAEEREQALSDIYRVMRPGEPPTLETAESLFSGLFFDPERYDLSAVGRVKLNMRL
DLDVEDTVTTLRTEDILEVVKTLVNLKDGKGEVDDIDNLGNRRVRSVGELLENQYRVGLL
RMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKRR
VSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLASFSRVNKYGFIET
PYRKIIDGKVTNDVVYLSAMEEAKHTIAQASAELDEEGRFTEELVSSRQAGEFLMALPDQ
VTLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPFVGTGMEETVA
RDSGAAIAARRSGVVDQVDATRIVIRASGDVEATQSGVDIYTLMKFQRSNQSTCINQRPL
VKVGETVNAGDIIADGPSTEFGELALGRNALVAFMPWNGYNYEDSILISERIVKDDVFTS
IHIDEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVEPGDILVGKITPK
GESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVTGTIVDVRVFNRHGIDKDERAMAIER
EEIERLKKDSDDERNILNRATWSRLKEMLLGQVATGAPKGVKKGSTIDADLLDSVDRHEW
WKFAVQDDAMQSNLEAVKVQYDEAVKRITDKFHDRRDKLERGDELPPGVLKMVKVFVAVK
RKLQPGDKMAGRHGNKGVISRILPAEDMPFLADGTPVDLVLNPLGVPSRMNVGQIFETHL
GWAARNLGMQVSAMLEDWREANPEAQPGTMPEPVKERLKEIYGGHYIDEIEARDAGQIIE
LANNTRTGIPMGTPVFDGAREADVSAMLELAGLESSGQSTLYDGRTGEAFDRKVTVGIIY
MLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEML
TVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELKTDEPGYDTDGV
QIAAE |
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| NT seq |
4158 nt +upstreamnt +downstreamnt
atggctaccaaagcaatcgacggaacgggcacgctcaagcgccgcatccgcaaggtgttc
ggcgacatccacgaagtggtgcagatgccgaacctgatcgaggttcagcgcgaatcctac
gaacagttcctgcgcagcgatccttcgatcggctatgtctccgggctggaaaagacgctg
cgttcggtcttcccgatccgcgacttcgccggcaccgccgagctcgacttcgtcaattac
gagctggagccccccaagttcgacgtcgaggaatgccgtcagcgcggcatcacctatgcg
gcgccgatgcgcgttaccctccgcctgatcgtgttcgaggtcgatcccgatacggaagcc
cggtcggtgctcgatatcaaggagcaggacgtctatatgggcgacatgccgctgatgacg
gggaacggcacgttcttcatcaacggcaccgagcgcgtgatcgtcagccagatgcaccgt
tcgccgggcgtgctgttcgaccatgatcgcggcaagacccacgcatcgggcaagtatctg
ttcgcggcgcgcgtgatcccgtatcgtggctcgtggctcgatttcgagttcgacgcgaag
gacatcgtcaacgtccgcatcgatcgcaagcgcaagctgccggtcacgacgctgctctat
gccctcggcctgaacagcgaggacatcctcaactatttctacaaccgcgtgacctatgtc
cgcggcccgaacggctggcagatccccttccaggccgaaaactggcgcggccagaagccg
atgtacgacatcgtcgatgcgctgtcgggcgagatcgtgttcgcgtcggggcagaagatt
tcgccccgcgccgcgaacaaggctgccaaggacgggctgaccacgctgctgatcccgacc
gaggaaatcttcggtcgctacagcgcgttcgacctgatcaacgaggcgaccggcgaaatc
tatatcgaagccggcgacgaagtctcggctgagaacctcgaaatgctcgacaaggccgga
atcgaccagctcgagctgctcgacatcgatcacatcgccacgggtccgtggatccgcaac
acgctcaaggtcgacaaggcagaagagcgcgagcaggcgctgtccgacatttatcgcgtg
atgcgccccggcgagccgccgacgctggaaaccgcggagtcgctgttctcgggcctgttc
ttcgatcccgagcgctacgacctgtcggctgttggccgcgtcaagctcaacatgcgcctc
gacctcgacgtcgaggacacggtgacgacgctgcgcaccgaggatattctcgaagtcgtc
aagacgctcgtgaacctcaaggacggcaagggcgaagtcgacgacatcgacaacctcggc
aaccgtcgtgtgcgttcggtgggcgagctgctggagaaccagtatcgcgtcggcctgctc
cgcatggagcgcgccgtgaaggagcgcatgtcgtcggtcgatgtgtcgaccgtgatgcca
aacgacctgatcaacgcgaagcccgcggtcgctgcggtgcgcgaattcttcggttcgtcg
cagctctcgcagttcatggatcagaccaacccgctgtcggaagttacccacaagcgccgc
gtgtcggcacttggaccgggtggtctgacgcgtgagcgcgcgggcttcgaagtccgcgac
gttcatccgacgcattatggccgcatctgcccgatcgaaacgccggaaggcccgaacatc
ggtctgatcaactcgctggcgtcgttcagccgggtgaacaaatacggcttcatcgaaacg
ccgtaccgcaagatcatcgacggcaaggtgaccaacgacgtcgtctatctgtcggcgatg
gaagaggccaagcacacgatcgcgcaggcctctgccgagctcgacgaggaaggccgcttc
accgaggaactggtgtcctcgcgtcaggcgggcgaattcctgatggcgctgcccgaccag
gtcacgctgatggacgtcagccccaagcagctcgtctcggtcgccgcatcgctcattccg
ttcctggaaaacgatgacgccaaccgcgcgctgatgggctcgaacatgcagcgtcaggcc
gtgccgctggtgaaggcggaagcgcccttcgtcgggaccggcatggaagaaaccgtcgcg
cgtgactccggcgccgccatcgcggcccgccgttcgggcgtggtcgatcaggtcgacgcg
acccgtatcgtcatccgcgcctcgggcgatgtcgaagccacgcagagcggcgtcgacatc
tacacgctgatgaagttccagcgctcgaaccagtcgacctgcatcaaccagcgtccgctg
gtgaaggtgggcgagaccgtcaatgccggcgacatcatcgccgacggcccgtcgaccgag
ttcggcgagctggcgctgggccgcaatgcgctcgtcgcgttcatgccctggaacggctat
aactatgaggattcgatcctcatcagcgagcggatcgtgaaggacgacgtgttcacgtcg
atccatatcgacgagttcgaagtgatggcccgcgacaccaagctggggccggaggacatc
acccgcgacatcccgaacgtcggcgaggaggcactgcgcaacctcgacgaggccggcatc
gtctatatcggcgccgaagtggagccgggcgacatcctggtcggcaagatcacccccaag
ggtgaatcgccgatgacgccggaggaaaagctcctccgcgccatcttcggcgaaaaggcc
agcgacgtgcgcgacacctcgctccgcctgccgccgggcgttaccgggacgatcgtcgac
gtgcgcgtcttcaatcgccacggcatcgacaaggacgagcgcgcgatggcgatcgagcgc
gaagagatcgagcgcctgaagaaggacagcgacgacgagcgcaacatcctcaaccgcgcc
acctggtcgcgcctgaaggaaatgctgctcggccaggtcgcgaccggcgcgccgaagggc
gtcaagaagggctcgacgatcgacgccgacctgctcgactcggtcgaccgccacgaatgg
tggaagttcgcggtgcaggacgacgcaatgcagtcgaacctcgaagccgtgaaggtccag
tatgacgaggcggtgaagcgcatcaccgacaagttccacgatcgtcgcgacaagctggag
cgtggcgacgagctgccgccgggcgtgctcaagatggtcaaggtcttcgtcgcggtgaag
cgcaagctgcagccgggcgacaagatggccggccgtcacggcaacaagggcgtgatctcg
cgcatcctgccggcggaggacatgccgttcctcgccgacggtacgccggtcgacctcgtg
ctcaacccgctgggcgtgccttcgcgcatgaacgtcgggcagatcttcgagacgcatctt
ggctgggccgcccgcaatttgggcatgcaggtctcggcgatgctggaggattggcgcgaa
gccaaccccgaggcacagccgggcacgatgcccgagccggtcaaggagcgcctgaaggag
atctacggcggtcactatatcgacgagatcgaagcacgcgacgcgggccagatcatcgag
ctggcgaacaacacccgcacgggcattccgatgggcaccccggtgttcgacggcgcgcgc
gaagccgatgtgtcggcgatgctggaactggcaggcctcgaatcctcgggccagtcgacg
ctctatgacggtcgcaccggcgaggcgttcgatcgcaaggtgacggtgggcatcatctac
atgctcaagctccaccaccttgtggacgacaagatccacgcccgctcgatcgggccgtac
agcctcgtcacccagcagccgctgggcggtaaggcgcagttcggcggacagcgcttcggc
gaaatggaagtgtgggcgctccaggcgtatggcgcggcgtacacgctccaggaaatgctg
acggtgaagtcggacgacgtggtcgggcgcaccaaggtctatgaagcgatcgtcaagggc
gacgacacgttcgaggccggcattccagagagcttcaacgtgctcgtcaaggaaatgcgc
tcgctgggcctcaacgtcgagttgaagaccgacgagccgggctacgacaccgacggcgtc
cagatcgcggcggagtaa |
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