Sphingomonas hengshuiensis: TS85_12195
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Entry
TS85_12195 CDS
T03848
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi00300
Lysine biosynthesis
sphi00470
D-Amino acid metabolism
sphi01100
Metabolic pathways
sphi01110
Biosynthesis of secondary metabolites
sphi01120
Microbial metabolism in diverse environments
sphi01230
Biosynthesis of amino acids
Module
sphi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TS85_12195
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TS85_12195
Enzymes [BR:
sphi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TS85_12195
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJP72384
UniProt:
A0A7U4LFC5
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All DBs
Position
complement(2758776..2759999)
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AA seq
407 aa
AA seq
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MTPKPVGPIPADYAGQAALTLGGQGVAALAEAGTPVYLYDGAAIAARVARLRAALPAQVG
VHYAIKANPFAPLLAAIAPLVDGLDVASAGELDKAMVHKPASAISFAGPGKRDFELEAAI
RAGATINLESEGEAARALAIGAGLGVAPRLAVRVNPDFELRGSGMKMGGRASPFGVDAAR
VPALVRRLIAEGADWRGFHIFAGSQSLDTDAVIETQAATVALAARLAEEAGAVPPLVNLG
GGFGIPYFPGDRPLEVEAVGAALGEVLGQVSGVDFAVELGRWLVGEAGVYVTRIVDRKVS
QGEIFLVVDGGLNHHLAATGNFGTVVRRNYPVALAERIGAAPEETVTIVGPLCTPLDRLA
DRVALPRAEVGDLVAIFASGAYGPSASPAAFLGHVPVREVLVPAPNA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgactccaaaaccggtcgggccgattcccgccgactatgccggacaggcggctttgacc
ttgggcgggcaaggcgtggcggcgctcgccgaggcggggacgccggtctatctgtacgac
ggcgcggcgattgcggcgcgggtggcgcggttgcgcgcggcgctgccggcgcaggtcggc
gtgcattatgcgatcaaggccaatccgttcgcgccgctgctcgcggcgattgcgccattg
gtcgacgggctcgacgtcgcgtcggcgggcgagctggacaaggcgatggtgcataagcct
gcgtcggcgatcagctttgccgggccggggaagcgcgatttcgagctcgaggcggcgatc
cgggcaggggcgacgatcaatctggagtccgagggcgaggctgcgcgggcgctggcgatc
ggcgcggggctgggggtggcgccccggctggcggtgcgggtgaaccccgatttcgagttg
cgcggatcggggatgaagatgggcgggcgcgcgtcgccgttcggggtcgatgcggcgcgg
gtgcccgcgctggtgcggcggctgatcgcggaaggggcggactggcgcgggttccacatc
tttgcggggtcgcagtcgctggataccgacgcggtgatcgagacgcaggcggcgacggtg
gcgctggcggcgcggctggcggaggaagcgggggcggtgccgccgctggtcaatctgggc
ggcgggttcggcatcccctatttccccggcgacaggccgctggaggtcgaggcggtcggc
gcggcgctgggcgaggtgctggggcaggtttcgggcgtggacttcgccgtcgagctgggc
cgctggctggtcggtgaggcaggggtttacgtgacgcggatcgtcgaccgcaaggtcagc
cagggggagattttcctggtggtcgatggcgggctcaaccatcatctggccgcgacgggc
aatttcgggaccgtggtgcggcgcaattatccggtcgcgctggccgagcggatcggggca
gccccagaggagaccgtgacgatcgtcgggccgctctgcacgccgctcgaccggctggcc
gaccgggtggcgttgccgcgcgccgaggtcggcgacctcgtcgcgatcttcgcatcgggc
gcctatggcccgagcgcgagcccggcggcgttcctgggacatgtcccggttcgggaagtg
cttgtcccggcgcctaacgcctaa
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