Sphingomonas hengshuiensis: TS85_13805
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Entry
TS85_13805 CDS
T03848
Name
(GenBank) hypothetical protein
Organism
sphi
Sphingomonas hengshuiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
AJP72617
UniProt:
A0A7U4J9B2
LinkDB
All DBs
Position
complement(3126576..3132119)
Genome browser
AA seq
1847 aa
AA seq
DB search
MATKITLPRRRFFSLKGGQIELAVGFLLSTILESGAARAADAKAGGKVADGHPAAVPADA
AALLEALGGDAAAVKAMSVEELKALLTPEMLAQLDLGADFLDKLDTDLAEAIRDLEAAFR
KKIVVAAHSAAKVDGDSAEHQDGETAKDGADDGAAHGGGGVPLIAILAGLAVGGGAIALA
AGGSDDDEPANFVPVATSDSFTVAEDTAVTFDVRTNDTDANGDALTVTQINGTAITTTTP
VTVTGGVVSLGADGKLTFTPTANYSGSPSFTYTISDGAGGTSTATVTGTVTAVNDAPVAV
ADTFTVAEDTPVTINVRANDTDADGDTLTVTAVNGTAITTAAGVAVTGGVVTLVGGSLVF
TPTANYNGSPSFTYTVTDGKGGTATATVSGTVTAVNDAPVNTLPSDVATTTGATVLVAGL
SISDPDGTTGTFTTTLSVASGTLSIATVDGGATVTGSGSGTVTITGTLAQVNAALGATSF
TSAAGFSGNTTLTMTTSDGVLTDTDTLALNVGTVMNGVVQDGYISGATVFYDANGNGTYD
DGEPLATSNEQGQFSLAIPFGGTGLILGSGGVNIDTGLANVLPLKAPIGSTVVNPLTTLI
ATLMESGQSVEEANLAVSQAFGLPSGIDYTTFDFLSDSQDPAIALEIQKVAAQIAQVVSD
GVDAGLDAETLLSAITTSIGTGETVDLTSVDAIEALFVASGASAGDAAELAVAAAAVTQA
IDSATSPDQISDVQGELNAPGANLPPVATTDTITATEDGAPVTVNLIANDVDPEGGAVTL
TKINGVEVQVGSVVAVTGGTVTVGANGVVTFTPDADFNGTPSFAYTVADAAGVEQVGSVN
VTVDPVNDSPTGSNLDATVPLFGAVILSPLATATDVDGDALSFLIVDSKGIAVGETIVLF
DGVSTVTLNADGTLTFVSGSASTITFSYTISDGQDGLFTGLISVTPATDAAEISVTAAQL
ASFIDNIDAFPSVESIVVDGDGGVITVAQGSALLRADVTLAGDSVDIALDGGNSPFTLAE
LQEIGVDTVSGDDAIVIEVGRQSLVSLGEATIPTFAAGRAVTLEIASGALDGTATEVSAA
AANLVAAGFDTLTVPTGETLTLTLEQADALAGSLGIEDFADVAVAIGSSDVDALLGDLTN
LGALGIDHIDVVGDDVTITESQAAALAGAGIDFVDGDNVTIIADGTQLNTTLKGLSDLGV
DSVAVEDGVTQLFIDAGSGLGSISLGRMAAFNLAQTDGSLDVTVNVDAGTLDSGFDLGDT
ASGLAAIGVDQIGVVGDGALTMNYSQVSSIADAGLTFDASANITITASDAQVSALAADGG
LASLNIDTIDVADDSITITETQAAALASGNISFADGDAVTVISDGTQLNTSLKGLADLGV
DSVAVTDGVSVLSLGLGGSLDKISLGRAVSFTDAQSDASLDVTVTVDGGKLAAGFDTSAI
AGTLAASGVDHIGVTGDGALTMNYAQANAITEAGLTFDAGADITVTASVSQIESLDLVGV
GIDHIDANGAGATITDATAAALSAGGTDFVQSDVITVTAVGTELTTTLKGLQDLHVDKVA
VETGVEVLHVDAGDLSQVEASDLPQFDVSQSDTSLDVTLRVSISDLSDLDRLGTSLSEAG
IDHFGLDADPASYSAEEQASMASITAATGITFVQDSASSSTLSFSSFLTTSTDSDDSADT
HASTEPVEILDGAAASLFESGMLNAFTADSLVVDATDSGQYLATTLRDIADYGIDQVHVE
SGSGPVYVQFGALSGDGLSEIQSLFNHLTSEGPSSIFSGNDQIALVVDAQVADALSQIEG
AFDQLASIGFTEVDVLGGDSHAFASDAIDIKVIGEDDDLFHQLAHDR
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaaatcactcttccgcggcggcggttcttcagcctcaagggtggtcagatc
gaactcgccgttgggttccttctgtcgacgatccttgagtcgggcgcggcgcgcgctgcc
gatgcgaaggcgggcggcaaggttgccgacgggcatcccgcagctgtccccgcggacgcg
gcggcccttctggaagcccttggcggtgacgctgccgccgtgaaggcgatgtcggtggaa
gagctcaaggctctcctgactcccgagatgcttgcccagctcgacctgggtgccgatttc
ctcgacaagctcgataccgatctcgcggaagccattcgcgaccttgaggccgcgttccgc
aagaagatcgtcgtcgccgcgcacagcgccgcgaaggtcgatggtgattcggcggagcat
caggatggcgagactgccaaggacggcgccgatgatggtgccgcgcacggtggcggcggt
gttccgctgatcgcgatcctggctgggctggccgtcggtggcggcgccatcgcgcttgcg
gcaggcggcagtgacgacgacgagccggcgaacttcgttccggttgcgacgagcgacagc
ttcacggtggccgaggatacggcggtcaccttcgacgttcggaccaacgacaccgatgcg
aacggcgacgcgctgaccgtcacgcagatcaacggtactgcgatcacgaccacgacgccg
gtcaccgtgaccggcggcgtcgtgagcctgggcgccgacggcaagctgaccttcaccccg
accgcgaactatagtggttcgcccagcttcacctacacgatcagcgatggcgccggcggc
accagcacggcgaccgttaccggcaccgtgacggcagtcaacgatgccccggtcgcagtg
gcggacacgttcaccgttgccgaagataccccggtcacgatcaatgttcgcgcgaacgat
accgatgcggacggggacacgctcaccgtcacggcggtcaatgggaccgcgatcaccacg
gccgcgggcgtcgcggtcaccggcggcgtcgtcacgctggtcggcggcagcctcgtcttc
acgccgactgcgaactataacggttcgccgagcttcacctacactgtaaccgacggcaag
ggcggcacggcgactgctaccgtcagcggcaccgtgactgcggtcaacgatgctccggtc
aacacgcttccgagcgatgttgccacgaccacgggcgccacggtgctcgttgccgggctg
tcgatttccgatccggacggtaccacgggcaccttcaccacgacgctttcggtcgccagc
ggcacgctgtcgatcgcgaccgtggatggtggcgccacggtgaccggttcgggcagcggc
accgtcacgatcacgggcacgctggcgcaggtcaatgccgcgctcggcgcgaccagcttc
accagcgccgccgggttcagcggcaataccacgctgacgatgacgaccagcgatggtgtc
ctgaccgacaccgacacgctcgcgctgaatgtcggcacggtgatgaacggcgtcgtccag
gacggctatatcagcggcgccacggtgttctacgacgccaacggcaacggcacctatgac
gatggcgagccgctggcgaccagcaacgagcagggccaattctcgctcgccattcctttc
ggcgggacgggcctcatcctgggttcgggcggcgtcaacatcgacaccggcctcgcgaac
gttcttccgctcaaggcgccgatcggttcgacggtcgtcaacccgctgaccacgctgatc
gcgacgctcatggagtcggggcagagtgtcgaggaggcgaaccttgccgtttcgcaggcg
ttcggccttccgagcggtatcgactacacgaccttcgacttcctttccgacagccaggat
ccggcgattgcgctcgagattcagaaggttgcggcgcagatcgcgcaggtcgtctcggac
ggcgtcgatgccggtctcgacgccgagacgctgctcagtgcgatcacgacgagcatcggt
accggcgaaacggtcgatctgaccagcgtcgatgcgatcgaagccctgtttgttgcgtcg
ggcgcaagcgctggtgatgcggcggagctggcggttgcggcggcggcggtaacccaggcg
atcgattcggcgacgagcccggaccagatttcggacgttcagggcgaactcaacgcgccc
ggtgcgaacctgcccccggtcgccaccaccgacacgatcacggcgaccgaggacggcgcg
ccggtcacggtcaacctgatcgcgaacgacgttgaccccgaaggcggcgcagtgacgctg
accaagattaacggcgtcgaggttcaggtcggttcggtggttgcggtcaccggggggacg
gtaaccgtcggcgcgaacggcgtcgtcaccttcacgcccgacgcagacttcaacggcacg
cccagcttcgcctacacggtcgccgacgcggcgggcgtggagcaggtcggttcggtcaac
gtgaccgtcgatccggtcaacgactcgcctaccggctcgaatcttgatgcgaccgtgccg
ctattcggggcggtcattctttcgccgctcgcgaccgcgacggatgtcgatggcgatgcg
ctttcctttttgatcgtcgactcaaaggggatcgcggtaggcgagaccatagttctgttc
gacggcgtcagcaccgtcacgcttaacgccgacggcacgctgaccttcgtgagcgggagc
gcgagcaccatcacgttcagctacacgataagcgacgggcaggacggtctgttcactggc
ttgatcagcgtcacgccggcgaccgacgccgccgagatttcggtgactgcggcgcaactc
gcgtcgttcatcgacaatatcgatgccttcccgtcggtggagagcatcgtcgtggacggc
gacggcggcgtcatcaccgtcgcgcagggctcggcgctgctcagggcggacgttacgctc
gcgggtgattcggtcgacatcgcgctcgacggcgggaattcgcccttcacgctcgccgaa
ctccaggaaatcggtgtcgacaccgtgtccggcgacgatgccatcgtaatcgaagtgggc
cgccagagcctggtgtcgctcggcgaggcaacgatccccacgttcgcggccggtcgtgcg
gtaacactcgagatcgcttcgggcgcactcgatggcactgcaaccgaggtctccgccgcc
gcagccaacctcgtcgccgcagggttcgataccctgaccgttccgacgggcgagacgctg
acgctcacgctcgagcaggcggacgcgctcgcgggttcgctcggcatcgaggactttgcg
gatgtcgcggtcgcgatcggttcgtcggatgtggatgcactgctcggtgacctgaccaat
ctcggcgcgcttggcatcgaccatatcgacgtcgtcggcgacgatgtaacgatcacggag
agccaggctgccgcgctggcgggtgcggggattgacttcgtcgatggcgacaatgtcacg
atcatcgccgatggcacccagctcaatacgacgctcaaggggctttcggacctcggtgtc
gactcggtcgcggtcgaagacggcgtaacccagctgtttattgacgcgggttcgggcctc
ggcagcatttcgctggggcgcatggccgcgttcaacctcgcccagaccgatggctcgctc
gacgtgacggtcaatgtcgatgcgggcacgctcgacagcggcttcgacctcggcgacacg
gcgtcgggtcttgcggcgatcggggtcgatcagatcggcgtcgtcggcgacggcgcgctt
acgatgaactacagccaggtatcctcgattgcggatgccggtctcacgttcgatgcgtcg
gcgaacatcaccatcactgctagcgacgcacaggtttcggcgctggcggcggatggcggg
ctggcgagcctgaacatcgacacgatcgatgtcgcggacgacagcatcacgatcaccgag
acgcaggccgcggcgctcgcaagcgggaacatctcgttcgccgacggcgacgcagtgacc
gtgatcagtgacggtacgcagctcaacacctcgctcaaggggctggcggacctcggtgtc
gactcggttgcggtcaccgacggggtcagcgtcctgtcgctcggcctgggcggcagcctc
gacaagatttcgctgggtcgtgcggtttccttcaccgacgcacaatcggatgcgtcgctc
gacgtcacggtcaccgtcgacggtggcaagctggcggcgggcttcgacacgtcggccatt
gccggcacgcttgcggcgagcggcgtggatcatatcggcgtcaccggcgacggtgcgctg
acgatgaactatgcgcaggccaatgcgataaccgaagcgggcctgaccttcgatgcgggc
gcggacatcacggtgaccgcatcggtctcgcagatcgaatcgctcgacctggtcggtgtc
gggatcgaccatatcgacgccaatggcgcgggtgcgacgatcaccgatgcaacggcagca
gcgctcagcgccggcggcacggacttcgtccagagcgacgtcatcacggtcaccgcggtc
ggcaccgaactcaccacgacgctcaagggcctgcaggacctgcacgtcgacaaggtcgcg
gtcgagaccggggtcgaggtgctccatgtcgatgcgggtgatctgagccaggtcgaagct
tcggacctgccgcagttcgacgtgtcgcagagcgatacttcgctcgatgtgacgctgcgt
gtgtcgatcagcgacctcagcgatctcgatcggctgggtacctcgctcagcgaagcaggg
atcgatcatttcggcctcgacgccgatccggccagctactccgccgaggagcaggcttcg
atggccagcatcactgcggccacgggtatcaccttcgtccaggactcggcttcgtcgagc
acgctgagcttctcgtccttcctcacgacgtcgaccgacagcgacgacagcgcggacacg
catgcgagcaccgagccggtcgagatcctcgacggcgccgctgcctcgctgttcgaatcg
gggatgctgaatgccttcacggcagacagtctggtcgtcgacgcgaccgactcgggccag
tatctcgcgacgacgctgcgcgacatcgccgattacggcatcgatcaggtccatgtcgaa
agcggcagcggcccggtatatgtccagttcggcgcgctcagcggcgatggtctcagcgaa
atccagtcgctgttcaatcacctgacgtccgaagggccgtcgagcatcttcagcggcaac
gaccagattgcactggtggtggacgcgcaggtggcagatgcgctatcgcagatcgaaggg
gctttcgatcagctcgcttcgatcggcttcaccgaagtcgatgtgttgggtggcgacagc
cacgccttcgccagcgacgcgatcgatatcaaggtgatcggcgaagacgacgacctcttc
caccagttggcgcacgaccggtaa
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