Sphingomonas hengshuiensis: TS85_18055
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Entry
TS85_18055 CDS
T03848
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphi03016
]
TS85_18055
Enzymes [BR:
sphi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TS85_18055
Transfer RNA biogenesis [BR:
sphi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TS85_18055
Prokaryotic type
TS85_18055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AJP73291
UniProt:
A0A7U4JAK9
LinkDB
All DBs
Position
complement(3991628..3992638)
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AA seq
336 aa
AA seq
DB search
MHGWILLDKPLGLGSTQGVSAVKRALREGGYGKFKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDSDKVYEFTIGFGVQTDTLDLEGTVIAESEVRPALAEIEAMLPRFTGPIAQVPPA
YSALKVDGARAYDLARAGEQVVLPSRDVTIHSLTQSSPARGRWHAKRDGGGGSDSITDGS
PPPPTAFGGHLPLAGEDRVSVPLSEITLTAHVSKGTYIRSLARDIALALGTVGHVTMLRR
TKAGPFTLDSAISLDKLHEAGKARTLEDILLPLRAGLDDIPALSLTPDQAGLLRRGQVLA
GIAAEAGHYFACAGETPVALVEAQDGIVRVVRGFNL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatccttctcgacaagccgctcgggctcggctcgacccagggcgtgagc
gcggtcaagcgtgcgctgcgcgaaggcggctatggcaagttcaaggtcggccatggcggg
acgctcgatccgctggcgacgggcgtgctgccgatcgcggtgggcgaggcgaccaagctg
gcggggcggatgctcgacagcgacaaggtgtatgagtttacgatcgggttcggggtgcag
accgatacgctcgacctggagggcacggtcatcgccgagtccgaggtgcgcccggcactg
gcggagatagaagcgatgctgccgcgcttcaccggtccgatcgcacaggtgcccccggcc
tattcggcgctgaaggtcgatggcgcgcgcgcctatgacctcgcccgcgcgggcgaacag
gtggtgttgccgagccgggatgtgacgatccattcgctgacgcaatcctcccccgccagg
gggaggtggcacgcgaagcgtgacggagggggaggaagcgactcaataaccgacgggagt
cctccccctccgaccgcctttggcggccacctccccctggcgggggaggatcgcgtcagc
gtgcccctctcggaaatcaccctcaccgcgcatgtctccaagggcacgtacatccgcagc
ctcgcgcgcgatatcgcgctggcgctcggcacggtcggccatgtcaccatgctccgccgg
accaaggcggggccgttcacgctcgactccgcgatttcgctggacaaattgcacgaagcg
ggtaaggcccgcacgcttgaagacatactcctgccgttgagggcggggctggacgacatc
ccggctctatccctcacccccgaccaggcagggctgctccgcagggggcaggtcttggcc
gggattgctgcggaagcgggccactattttgcgtgcgcgggggagactccggtcgcgctg
gtggaggctcaggacgggatcgtccgggtcgtccgcggcttcaatctgtaa
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