Sphingomonas hengshuiensis: TS85_18440
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Entry
TS85_18440 CDS
T03848
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TS85_18440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_18440
Enzymes [BR:
sphi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TS85_18440
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TS85_18440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AJP73350
UniProt:
A0A7U4JAN8
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All DBs
Position
4074805..4076184
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AA seq
459 aa
AA seq
DB search
MRRVTLAAEDDFAGWRDAARALAQAGVAPSDVVWQVGEQPGDLFSAPELPGGGTKGFTVQ
RGFLELAQSALLHADPQRFAWLYSLLVGLIDQPRRIDDRADPLVRRIEDMAKAVRRDIHK
MRAFVRFREVDDGGTPRYVAWFEPEHHIVRANARFFVDRFAAMRWSILTPELSLHWDGAT
LREGPPARREDAPGDDPVEAMWKTYYASTFNPARLKVGAMRKEMPRKYWHNMPETALVKE
LVAGARQRETAMVANARDALGGNSGDAWEALREEARGCTRCHLHAHATQTVFGEGPVDAR
MMVIGEQPGDQEDLAGHPFVGPAGQMFDRAIAAAGIDRATLYVTNAVKHFKFEPRGKRRI
HAKPDAGEISACRWWYEQERLLVRPAVTLALGATAARQMLGKVVTIGRERGRAIELAEGG
IGWVTIHPSFLLRMPDKARVEDEFAAFVQDLRGAAALAG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgagtgaccctcgccgccgaggacgacttcgccggatggcgcgacgctgcgcgg
gcgctggcccaggcgggcgtcgcgccgtctgacgtggtctggcaggtgggcgaacagccg
ggcgatcttttcagcgcgcccgaattgcccggcggcggaacgaaaggcttcaccgtccag
cgcgggtttctggagcttgcccagtcggcgctgctgcacgccgatccgcagcgcttcgca
tggctctactcgctgctcgtcggcctgatcgaccagccgcgccgcatcgacgatcgcgcc
gatccgctggtgcgccgcatcgaggacatggccaaggcggtccgccgcgacatccacaag
atgcgcgcgttcgtccgctttcgtgaagtcgatgacggcggcaccccgcgctatgtcgcc
tggttcgagcccgagcatcatatcgtccgcgccaatgcccgcttcttcgtcgatcgcttc
gcggcgatgcgctggtcgatccttacccccgaactgtcgctgcactgggacggcgcgacg
ctgcgcgagggcccgcccgcgcggcgcgaggacgcgcccggcgacgatccggtcgaggcg
atgtggaagacctattacgcctccaccttcaatcccgcgcggctcaaggtgggcgcgatg
cggaaggagatgccgcgcaaatactggcacaacatgcccgaaaccgcgttggtcaaggaa
ctggtggcgggcgcgcgccagcgggaaacggcgatggtggcgaacgcacgcgatgcactc
ggcggcaacagcggcgacgcatgggaagcgctgcgcgaagaggcgcgcggctgtacccgc
tgccatttgcacgcccatgcgacgcagacggtgttcggcgaaggcccggtcgatgcgcgg
atgatggtgatcggcgagcagcccggcgaccaggaggacctggccgggcacccctttgtc
ggcccggcggggcagatgttcgaccgcgccatcgcggcggcagggatcgaccgcgcgacg
ctctacgtcaccaatgcggtcaagcacttcaagttcgagccgcgcggcaagcgccgcatc
catgcgaagcccgacgcgggcgagatcagcgcgtgtcgctggtggtacgagcaggagcgg
ctgctcgtccggcccgcggtcacgctcgcgctgggcgccaccgcggcgcggcagatgctg
ggcaaggtcgtgacgatcggtcgcgaacgtggccgcgcgatcgagctggccgagggcggg
atcggctgggtgacgatccatccgagcttcctgctgcggatgcccgacaaggcgcgcgtg
gaggacgagttcgccgcgttcgtccaggatttgcgcggcgcggcggcgctcgcgggttag
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