Sphingomonas hengshuiensis: TS85_18500
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Entry
TS85_18500 CDS
T03848
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphi03000
]
TS85_18500
Transcription factors [BR:
sphi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TS85_18500
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AJP73356
UniProt:
A0A7U4JAQ2
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Position
4092543..4093748
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AA seq
401 aa
AA seq
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MTAPFDLNLRHLRALSAVVEQGSLSAAAQAVSLSQPALTQGLRKLERQLGTALFDRRSDG
VAPTPAGLCMAQRSASAFAHLAHATRGGGRGTRGFARPEQLMTATQLDAFLRLADAGSFA
AAAAASGLSQPALHRAVRDLEQICATPLAERRGRGVMLTAAGRKVARGIRLAAGEIAAGI
VEAGDGADSGRIAIGAMPLSRALILPRAIAAFSRGTPRAVLDVVEGSWRELVEPLYDGVI
DLMIGALRDEAPPGLEQRALFDDRLTVIGRSGHPLAGVADPGLDALAQHGWIVGSAGTPL
RAQWEAMFARQPLPPAPIECGSVMVIRGVLRDSDLLTLLSPDQVSLEIDSGMLAAIGRPL
AHGVRTIGITTRAGWRPTAAAARLIALIEAAADRGRVQEIQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccccttcgacctcaatctgcgccatctgcgcgcgctgtccgccgtggtcgaa
cagggcagcctgagcgcggcggcacaggcggtcagcctgtcgcagcccgcgctgacgcag
gggctgcgcaagctggagcggcaattgggcaccgcgctgttcgatcgccgctcggacggc
gtcgcgcccacccccgcggggctgtgcatggcgcagcgcagcgccagcgcctttgcgcat
ctggcgcacgccacgcgcggcggcgggcggggcacgcgggggtttgcccggcccgagcaa
ctgatgaccgcgacgcagctcgatgcttttctaaggctcgccgatgcgggcagctttgcc
gcggcggcggcggcgagcggattgtcgcagcccgcgctccaccgcgcggtgcgcgacctc
gagcagatttgcgcgactccgctggccgagcggcgcgggcgcggcgtcatgctgacggcg
gcggggcgcaaggtcgcgcgcggcatccggctggcggcgggcgagatcgcggcggggatc
gtcgaggcgggcgacggcgccgatagcgggcggatcgcgatcggcgcgatgccgctgtcg
cgcgcgctgatcctgccccgcgcgatcgcggcgttcagcaggggcacgccgcgcgcggtg
ctcgacgtggtcgaggggtcgtggcgcgaactggtcgagccgctgtacgacggcgttatc
gacctgatgatcggcgcgttgcgcgacgaggcgccgccggggctggagcagcgcgcgctg
ttcgacgatcggctgacggtgatcgggcgcagcgggcatccgcttgccggcgtcgcggac
ccggggctcgatgcgctggcgcagcatggctggatcgtcggttcggcgggcacgccgctg
cgcgcgcaatgggaggcgatgttcgcgaggcaaccgctgccgccggcgccgatcgaatgc
ggatcggtgatggtgattcgcggcgtgctgcgcgacagcgacctgctgacgctcttgtcg
cccgatcaggtttcgctggaaatcgacagcgggatgctggcggcgatcgggcgtccgctg
gcgcatggcgtgcgcacgatcggcatcaccacgcgcgccggatggcgccccacggcggcg
gcggcacggctcatcgcgctgatcgaggcggcagcggacagaggcagagttcaggaaatc
caatag
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