KEGG   Sphingomonas hengshuiensis: TS85_19550
Entry
TS85_19550        CDS       T03848                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
sphi  Sphingomonas hengshuiensis
Pathway
sphi02020  Two-component system
sphi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sphi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    TS85_19550
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    TS85_19550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sphi03021]
    TS85_19550
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:sphi02035]
    TS85_19550
Transcription machinery [BR:sphi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TS85_19550
Bacterial motility proteins [BR:sphi02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    TS85_19550
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Sigma70_ECF
Other DBs
NCBI-ProteinID: AJP73515
UniProt: A0A7U4JB09
LinkDB
Position
complement(4314171..4314950)
AA seq 259 aa
MNATPLRKLGPMASLAQHVPDTSPLTYARRRAPRRDAEALVRRHLPLVRRIAWHIHGSMS
AIVDVEDLIQIGLVALVEAVSGFEDRGQVTFEQYLATRLRGAMIDELRRQATLTRGAMRR
RREYQNAVAALAAASGHLPSDAEVAEKLGVTPEKLRTDYATAEALRFESIDDHYADDSPW
FMSDAPDAFDQLADRDQRDTLVAAIASLPEREAQVIQLYYVEELNLEEIGQVLGVGAARI
CQIKASAHARLKRALQRRG
NT seq 780 nt   +upstreamnt  +downstreamnt
atgaacgcaacacccctcaggaagctcggacccatggcttcattggcccaacacgtgccg
gatacctcgccgctgacctatgcccgccggcgcgcgccgcggcgcgatgcggaggcgctg
gtgcgccgccatctgccgctggtgcggcgcatcgcgtggcacatccacggatcgatgagc
gcgatcgtcgatgtcgaggacctgattcagatcgggctggtcgcgctggtcgaggcggtg
agcggcttcgaggatcgcgggcaggtgacgttcgaacaatatctggcgacgcggctgcgc
ggcgcgatgatcgacgagctgcggcgccaggcgacgctgacccggggcgcgatgcggcgg
cggcgggagtaccagaacgcagtggccgcgctggccgccgcgtcgggccatttgccgagc
gacgccgaggtcgccgagaagctgggggtgacgccggagaagctgcgcaccgactatgcg
accgcagaggcgctgcgcttcgaatcgatcgacgaccattatgccgatgattcgccctgg
ttcatgtccgacgcccccgacgccttcgaccagctcgccgaccgcgaccagcgcgacacg
ctcgttgccgcgatcgcatctctgcccgagcgcgaggcgcaggtgatccagctttattat
gtcgaggagctcaacctcgaggaaatcggccaggtcctcggcgtgggcgcggcgcgaatc
tgccagatcaaggcatcggcgcacgcccggctgaagcgcgcgctccagcggcggggttaa

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