KEGG   Sphingomonas hengshuiensis: TS85_20090
Entry
TS85_20090        CDS       T03848                                 
Name
(GenBank) tRNA modification GTPase TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
sphi  Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:sphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sphi03016]
    TS85_20090
Transfer RNA biogenesis [BR:sphi03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    TS85_20090
 Prokaryotic type
   Methyltransferases
    TS85_20090
SSDB
Motif
Pfam: TrmE_N MnmE_helical MMR_HSR1 FeoB_N Dynamin_N RsgA_GTPase ABC_tran AAA_28 AAA_29 AAA_25 DUF5860 Arf AAA_18 Guanylate_kin
Other DBs
NCBI-ProteinID: AJP73606
UniProt: A0A7U4JB69
LinkDB
Position
4408298..4409587
AA seq 429 aa
MDTIYAVSSGAPPAAIAVLRISGARAFDAVRALAGRLPAPRRASLCSLRDPADSTLLDRA
LVLVFPSPETATGEDLAELHLHGGRAVVRAVERALAVLPGMRAAAAGEFTRRALAHGRLD
LSEAEGLGDLLAAETESQRRVAIRSAEGGVRRAVEAWSAQTLDLAAQVEALLDHSDEDDV
SAEALTLSALQAEARAIGQAIEAVTARPPVERLRDGLRVVLAGPPNAGKSTLLNALAGRE
AAIVSPVAGTTRDRIEVPLVRDGLAYVFTDTAGLSDAPGDAIEAIGIARAREALGGADLL
LWLGDDAPPETPPGLWLHARADAPGRGVTQPGQVAVSAATGMGIDAVWEGLAELGGALVP
PPDLIALNQRQRALCAAAGDALRRATGQDDLLLLAEELRTALRCFDAVTGRAGVEAMLDS
LFARFCIGK
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggatacgatttacgcggtgtcgagcggtgcgccgcccgccgcaatcgctgtgctgcgg
atcagcggcgcgcgggcattcgatgccgtgcgtgcgcttgccgggcgactgcctgcgccg
cgccgggcgagcctgtgcagccttcgcgatccagcggattcgacgttgctcgatcgcgcg
ctggtgctggtgtttcctagccctgaaaccgcgaccggcgaggatctggccgagcttcac
ctccacggcgggcgcgcggtggtgcgcgcggtggaacgcgcgctcgccgtactaccaggg
atgcgcgccgcggctgcgggcgagttcacccggcgcgcgctcgcgcatggccggctcgac
ctgagcgaagccgaggggctgggggatctgctcgccgccgaaaccgagagccagcggcgg
gtggcgatccggtcggccgagggcggggttcggcgcgcggtggaggcgtggtcggcgcaa
acgctggacctcgccgcgcaggtcgaggcgttgctcgaccatagcgacgaggatgatgta
tcggcggaggcgctgacgctgtcggcgctccaggccgaagcgcgcgcgattgggcaggcg
atcgaggccgtgaccgcgcgccccccggtcgaacggcttcgcgacgggctccgcgtggtg
cttgcggggccgcccaatgccggcaagtcgaccttgctcaatgcgcttgccgggcgcgag
gcggcgatcgtctcgcctgtcgccgggactacgcgggatcggatcgaagtgccgctggtg
cgcgacggtctggcctatgtgttcaccgacaccgccgggctctcggatgcgcccggcgat
gcgattgaggcgatcggcattgcccgcgcgcgcgaggcgctgggcggtgccgatctgcta
ttgtggctcggcgacgatgcgccgccggagacaccgccggggctgtggctccacgcccgt
gccgatgcgcccgggcgcggcgtcacgcagccagggcaggtcgcggtgtcggctgccact
gggatggggatcgatgccgtgtgggaagggctggcagagctgggcggggcgctcgtcccg
ccgcccgatctgatcgcgctcaaccagcgccagcgcgccctctgcgccgctgctggcgat
gcattgcgccgtgccacggggcaggacgacctgttgctactggcggaggaactgcgcacc
gcgctgcgctgtttcgacgccgtgacggggcgggcaggggtcgaggcgatgctcgacagc
ctcttcgcgcggttctgcatcggcaaatga

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