Sphingomonas hengshuiensis: TS85_20090
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Entry
TS85_20090 CDS
T03848
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphi03016
]
TS85_20090
Transfer RNA biogenesis [BR:
sphi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
TS85_20090
Prokaryotic type
Methyltransferases
TS85_20090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
ABC_tran
AAA_28
AAA_29
AAA_25
DUF5860
Arf
AAA_18
Guanylate_kin
Motif
Other DBs
NCBI-ProteinID:
AJP73606
UniProt:
A0A7U4JB69
LinkDB
All DBs
Position
4408298..4409587
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AA seq
429 aa
AA seq
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MDTIYAVSSGAPPAAIAVLRISGARAFDAVRALAGRLPAPRRASLCSLRDPADSTLLDRA
LVLVFPSPETATGEDLAELHLHGGRAVVRAVERALAVLPGMRAAAAGEFTRRALAHGRLD
LSEAEGLGDLLAAETESQRRVAIRSAEGGVRRAVEAWSAQTLDLAAQVEALLDHSDEDDV
SAEALTLSALQAEARAIGQAIEAVTARPPVERLRDGLRVVLAGPPNAGKSTLLNALAGRE
AAIVSPVAGTTRDRIEVPLVRDGLAYVFTDTAGLSDAPGDAIEAIGIARAREALGGADLL
LWLGDDAPPETPPGLWLHARADAPGRGVTQPGQVAVSAATGMGIDAVWEGLAELGGALVP
PPDLIALNQRQRALCAAAGDALRRATGQDDLLLLAEELRTALRCFDAVTGRAGVEAMLDS
LFARFCIGK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggatacgatttacgcggtgtcgagcggtgcgccgcccgccgcaatcgctgtgctgcgg
atcagcggcgcgcgggcattcgatgccgtgcgtgcgcttgccgggcgactgcctgcgccg
cgccgggcgagcctgtgcagccttcgcgatccagcggattcgacgttgctcgatcgcgcg
ctggtgctggtgtttcctagccctgaaaccgcgaccggcgaggatctggccgagcttcac
ctccacggcgggcgcgcggtggtgcgcgcggtggaacgcgcgctcgccgtactaccaggg
atgcgcgccgcggctgcgggcgagttcacccggcgcgcgctcgcgcatggccggctcgac
ctgagcgaagccgaggggctgggggatctgctcgccgccgaaaccgagagccagcggcgg
gtggcgatccggtcggccgagggcggggttcggcgcgcggtggaggcgtggtcggcgcaa
acgctggacctcgccgcgcaggtcgaggcgttgctcgaccatagcgacgaggatgatgta
tcggcggaggcgctgacgctgtcggcgctccaggccgaagcgcgcgcgattgggcaggcg
atcgaggccgtgaccgcgcgccccccggtcgaacggcttcgcgacgggctccgcgtggtg
cttgcggggccgcccaatgccggcaagtcgaccttgctcaatgcgcttgccgggcgcgag
gcggcgatcgtctcgcctgtcgccgggactacgcgggatcggatcgaagtgccgctggtg
cgcgacggtctggcctatgtgttcaccgacaccgccgggctctcggatgcgcccggcgat
gcgattgaggcgatcggcattgcccgcgcgcgcgaggcgctgggcggtgccgatctgcta
ttgtggctcggcgacgatgcgccgccggagacaccgccggggctgtggctccacgcccgt
gccgatgcgcccgggcgcggcgtcacgcagccagggcaggtcgcggtgtcggctgccact
gggatggggatcgatgccgtgtgggaagggctggcagagctgggcggggcgctcgtcccg
ccgcccgatctgatcgcgctcaaccagcgccagcgcgccctctgcgccgctgctggcgat
gcattgcgccgtgccacggggcaggacgacctgttgctactggcggaggaactgcgcacc
gcgctgcgctgtttcgacgccgtgacggggcgggcaggggtcgaggcgatgctcgacagc
ctcttcgcgcggttctgcatcggcaaatga
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