Sphingomonas hengshuiensis: TS85_21115
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Entry
TS85_21115 CDS
T03848
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TS85_21115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphi03021
]
TS85_21115
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_21115
Enzymes [BR:
sphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TS85_21115
Transcription machinery [BR:
sphi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TS85_21115
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TS85_21115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AJP73762
UniProt:
A0A7U4JBN5
LinkDB
All DBs
Position
complement(4614193..4614537)
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKVSNRFDLVLFAAQRARQISGGAELTIDRDRDKNPVVALREIAEETVRP
RNLEESVISSLQRVQVDDEEAPDEVGSLAASAEALRLTAAAPPRNQNLGSDYEG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtcaccgttgaggattgcgtcgacaaggtttccaaccggttcgacctggtg
ctgtttgcggcgcaacgcgcccggcagatttcgggcggtgcggagctgacgatcgatcgc
gatcgcgacaagaacccggtcgtcgcgctgcgcgagatcgccgaagagaccgtgcgcccg
cgcaacctcgaggaatcggtcatctccagcctccagcgcgtccaggtcgacgacgaagag
gctccggacgaagtcggctcgctggccgcatcggcagaggcgctgcgcctcaccgccgct
gcaccgccgcgcaaccagaatctgggcagcgattacgagggctga
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