Sphingomonas hengshuiensis: TS85_21270
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Entry
TS85_21270 CDS
T03848
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_21270
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
TS85_21270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
ResIII
AAA_30
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_22
AAA_10
SLFN-g3_helicase
Hydrolase
AAA_16
T2SSE
TraG-D_C
AAA_7
CbiA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AJP73782
UniProt:
A0A7U4LGP2
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All DBs
Position
complement(4656186..4657790)
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AA seq
534 aa
AA seq
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MAGETGIFIGSAGDRRQELVLRRANRHGLIAGATGTGKTVTLQGLAEGFSAAGVPVFLAD
VKGDLAGVAMAGSPASKLHATFAERAAAIGDTEWRYGESPVQLWDLFGEQGHPIRTTISE
LGPLLLARLMGLNEVQEGLLTIAFHVADKEGLLLLDLDDLQAMLAYCAARADELTTTYGN
VSKASVGAIQRALLQLRSQGAEHFFGEPALEIADFIAHDDSGRGVVNILAADRLMASPRL
YASFLLWLLSELFETLPEIGDPDKPVLVFFFDEAHLLFDEAPAALLDKIEQVVRLIRSKG
VGVYFVTQNPIDIPEDIAGQLGNRIQHALRAFTPREERAIRAAADTFRANPGVDVATAIT
ELKVGEALVSLLQDDGAPSPVERTLIKPPRSRVGPIVADERRVLIQTDAVADRYDTAVDR
ESAEELLAAKAGQAAAAAAQAKASTDAEKAAAAQAKEDARLARDEARARREAERAAAADP
WNRAIKSATRSASSAAGRAVAAEVSKAVFGRKSGVGASVIGGLVRGMLGGLFRG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagacgggcattttcattgggtcggcgggcgatcggcggcaggaactggtc
ctgcgccgcgccaatcgccacgggctgatcgcgggcgccaccggcaccggcaagaccgtg
acgctccaggggctggccgagggcttctccgccgccggggtccccgtgttcctcgccgac
gtgaagggcgacctcgccggcgtcgcgatggccggctcccccgcgtcgaagctccacgca
accttcgccgagcgcgccgccgccatcggcgacaccgaatggcgctacggcgaatcgccg
gtccagctctgggacctgttcggcgagcagggccacccgatccgcaccaccatctccgaa
ctggggccgctgctgctcgcccggctgatggggctgaacgaggtgcaggaggggctgctc
accatcgccttccacgtcgccgacaaggaggggctactgctcctcgacctcgacgatctc
caggcgatgctggcctattgcgccgcgcgcgccgacgaactcaccaccacctatggcaat
gtcagcaaggccagcgtcggcgcgatccagcgcgcgctgctccagctgcgcagccagggt
gccgagcatttcttcggcgaacccgcgctcgagatcgccgatttcatcgcgcatgacgat
agcgggcgcggcgtcgtcaacatcctcgccgccgaccggctgatggcgtccccgcgcctc
tatgccagcttcctgctctggctgttgtccgaactgttcgagacgctccccgaaatcggc
gaccccgacaagccggtgctcgtcttcttcttcgacgaggcgcacctgctgttcgacgag
gcccccgcggcgctgctcgacaagatcgaacaggtcgtccgcctgatccgctccaagggc
gtcggcgtttatttcgtgacgcaaaacccgatcgacatccccgaggacattgccggccag
ctcggcaaccgcatccagcacgccctgcgcgccttcactccgcgcgaggagcgcgcgatc
cgcgccgccgccgacaccttccgcgccaatcccggcgtcgacgtcgccaccgcgatcacc
gagctcaaggtcggcgaggcgctcgtctcgctgctccaggacgacggcgccccctccccg
gtcgagcgcaccctgatcaagccaccccgctcgcgcgtcggcccgatcgtggcggacgag
cgccgcgtgctgatccagaccgatgccgtcgccgaccgctacgacaccgcagtcgaccgc
gaatcggccgaggaactcctcgccgccaaggcaggccaggccgccgccgccgctgcccag
gccaaggcaagcaccgacgccgaaaaggccgccgccgcgcaggcaaaggaggatgcccgc
ctcgcccgcgacgaagcccgcgcccggcgcgaagccgaacgcgccgccgccgccgatccg
tggaaccgcgcgatcaaatccgcgacccgctcggcctcctccgccgcgggccgcgcggtc
gccgccgaagtctcgaaggcagtgttcgggcgcaaatcgggagtcggcgccagcgtgatc
ggcgggctggtgcggggcatgctcggcgggctgttccgcggctga
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