Sphingomonas hengshuiensis: TS85_21845
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Entry
TS85_21845 CDS
T03848
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphi03032
]
TS85_21845
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_21845
Enzymes [BR:
sphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TS85_21845
DNA replication proteins [BR:
sphi03032
]
Prokaryotic type
DNA Topoisomerases
TS85_21845
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TS85_21845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJP73873
UniProt:
A0A7U4LH10
LinkDB
All DBs
Position
4776264..4778834
Genome browser
AA seq
856 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGKDYRVLASYGHVRDLPARDGSVNPDEGFAMEWEAYADKSK
QLKAITDLAKTADRLILATDPDREGEAISWHVQEVLRNKKALPKEVERVTFNAITKPAVL
TAMANPRELDTDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRIIVDRE
REIEGFTAQEYWSVTADMEQDGTPFQARLVKYKGDKIDRLTIGDGKTAEAAKKAVEEGRF
SVASVETKPATRNPPPPFTTSTLQQEAARKLGFSASHTMRIAQGLYEDGAITYMRTDGVQ
MDPDAIQEARKAVVTRYDGGYVPDKPRIYTTKAKNAQEAHEAIRPTDFSKDRAGSGDHGR
LYELIWKRALASQMASARMERTTIDLEDGSGQHGLRASGQVVLFPGYLALYEEGKDDEGD
EDSRRLPRMSAGDAPAKKAVHAEQHFTQPPPRFSEASLVKRLEELGIGRPSTYASIIQVL
KDRAYVRVEKNRFFAEESGRLLTAFLERFFEKYVSYDFTAGLEEELDDVSGGRAAWQAVL
EAFWRDFKPRTSEVMEQKPSDITAALDVFLESYLFPAKADGTDPRLCPNCGTGRLALRGG
RFGAFVACSNYPECKFTRRFAQPGGEGEESTGPEMLGNDPESGLPVERKSGRFGPYIQLG
EGKEAARASIPKDVELDLEMALKLLKLPRTVGTHPETGNPITASIGRYGPYLAHDGKYAR
LQSTMEVFETGMNAAVVKLAEAAAGGGRPARGAAREPLKILGAHPRTEAEIKLMEGRYGA
YVTDGETNATLPKSIDKDQLTLEEAAQLIDARAAAAPAKGKGKKKAAPKKAAAKKAPAKK
AAPKKAATKKTAASEA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtcatcgtcgaatcgcctgccaaggcgaagaccatcgagaaatatctgggc
aaggattaccgcgttctcgcgtcctatggccatgtccgcgaccttccggcgcgcgacgga
tcggtgaaccccgacgaggggttcgcgatggagtgggaggcctatgccgacaagtcgaag
cagctcaaggcgatcaccgatctcgccaagaccgccgaccgcctgatcctcgcgaccgac
cctgatcgcgagggcgaggcgatcagttggcatgtccaggaagtgctgcgcaacaagaag
gcgctgcccaaggaagtcgagcgcgtcaccttcaacgcgatcaccaagcccgcggtgctg
accgcgatggcgaacccgcgcgagctcgataccgacctgatcgacgcatatcgggcgcgg
cgtgctctggattatctggtggggttcaccctttcgccggtgctgtggcgcaagctgccc
ggcgccaagtcggcggggcgcgttcagtcggtcgcgctgcggattatcgtcgatcgcgag
cgcgagatcgaaggcttcaccgcgcaggaatattggtcggtcaccgccgacatggaacag
gacggcacgccgttccaggcgcggctggtcaagtataagggcgacaagatcgatcgcctg
acgatcggcgacggcaagaccgccgaggccgcgaaaaaggccgtcgaggagggccgcttc
tcggtcgcgtcggtcgagaccaagcccgcgacgcgcaatccgccgccgcccttcaccact
tcgacgctgcaacaggaagcggcgcgcaagctgggcttctcggccagccacacgatgcgg
atcgcgcaggggctctacgaggacggcgcgatcacctatatgcggaccgacggcgtccag
atggacccggacgcgatccaggaagcgcgcaaggccgtcgtgacgcgctatgacggcggc
tatgtgccggataagccgcgcatctacaccaccaaggcgaagaatgcgcaggaagcgcat
gaggcgatccgccccaccgatttctcgaaggatcgcgcaggctctggcgaccatggccgg
ctgtacgagctgatctggaagcgcgcgctggccagccagatggcgtcggcgcggatggag
cgcaccacgatcgacctggaggatggcagcggccagcacgggctgcgcgccagcgggcaa
gtggtgttgtttcccggctatctcgcgctctacgaagaaggcaaggatgacgagggcgac
gaggatagccgccgcctgccgcgcatgtcggccggcgacgcacccgccaagaaggcggtc
catgccgagcagcatttcacccagccgccgccgcgcttctccgaagcgtcgctggtcaag
cggctggaggaactggggatcgggcgtccgtcgacctatgcctcgatcattcaggtgctc
aaggatcgcgcctatgtccgcgtcgagaagaaccgcttcttcgccgaggagagcgggcgg
ctgctgacggcgttcctcgaacgcttcttcgagaaatatgtcagctacgattttaccgcc
gggctggaagaagagctggacgacgtctcgggcgggcgtgccgcgtggcaggcggtgctc
gaggcattctggagggacttcaagccgcgcacgtccgaagtgatggagcagaagccgtcg
gacattacggcggcgctcgatgtcttcctcgaatcctacctgttcccggccaaggcggac
ggcaccgatccgcggctatgccccaattgcggcaccgggcggctggcgctgcgcggtggg
cggttcggcgcgttcgtggcgtgctccaactatcccgaatgcaagttcacccgccgcttc
gcgcagccgggtggcgagggcgaggagtcgaccggccccgagatgctgggcaatgatccc
gagagcgggctgccggtcgagcgcaaatcggggcggttcggcccctatatccagttgggc
gagggcaaggaggcggcgcgcgcctcgatccccaaggatgtcgagctggacctcgaaatg
gcgctcaagctgctcaagctgccgcgcacggtggggacgcatccggagacgggcaacccg
atcaccgcgtcgatcggccgctatggcccctatctggcgcatgacggcaaatatgcgcgg
ctccagtcgacgatggaggtgttcgagacggggatgaacgccgccgtggtcaagctggcc
gaggcggcggcgggtggcgggcgtccggcgcgcggcgctgcgcgcgaaccgctcaagata
ctgggcgcgcatccgcggaccgaggccgagatcaagctgatggagggccgctacggcgcc
tatgtcaccgatggcgagaccaatgcgacgctgcccaagtcgatcgacaaggatcagttg
acgctggaggaagccgcgcaactgatcgacgcgcgcgccgcggctgcacccgcaaagggc
aagggcaagaagaaggcggctccgaaaaaggcggcggcgaaaaaggctcccgcaaagaaa
gcggcgcccaaaaaggccgcgaccaagaagacggcggcaagcgaggcgtag
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