Sphingomonas hengshuiensis: TS85_21885
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Entry
TS85_21885 CDS
T03848
Name
(GenBank) exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TS85_21885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_21885
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TS85_21885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJP73881
UniProt:
A0A7U4JBQ6
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All DBs
Position
4784176..4784937
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AA seq
253 aa
AA seq
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MALPPRSIIRVIDLETTGQAPPAHGVCEIGWQDVALQPDGRWELEGEGGSRLVNPGRPIP
PLTMAIHHIRDEDVADAPGWHDVARPILDPWPRRVALAAHRASFEEQFCTSSLTRGADWI
CTYKCALRLWPGTPGFSNQFLRYFRKPEGMEHERGLPAHRAFPDAYVTAFHLRDMLNEAS
VAQLIAWSKEPALEPRVRYGPDRGKEWCEIDDDALAGFLDDRDADIRFSAEHELARRRGG
GAVGRSSSMDLLL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcccccccgctccatcatccgcgtcatcgatcttgagaccaccggccaggcg
ccgcccgcgcacggggtgtgcgagatcgggtggcaggatgtcgcgctccagcccgacggt
cgttgggaactggagggtgaagggggcagtcggctcgtcaatccggggcggccgatccct
ccgctgaccatggcgatccaccatattcgcgacgaggatgtcgccgacgcgccggggtgg
cacgatgtcgcgcgcccgatcctcgatccctggccccgccgcgtggcgcttgcggcgcat
cgggcgagtttcgaggagcagttctgcacgtcctctctcactcggggcgcggattggatc
tgcacctataaatgcgcgctgcggctatggccggggacgccgggcttttcgaaccagttc
ctgcgctatttccgcaagcccgagggtatggagcatgagcgcgggctgcccgcgcaccgc
gcctttcccgatgcctatgtcactgcattccacctgcgcgacatgctgaacgaggcgagc
gtcgcccagcttatcgcctggtcgaaggagcccgcgctcgagccgcgcgtccgctatggc
cccgatcgcggcaaggagtggtgcgagatcgacgacgatgcgctcgccgggttcctcgac
gatcgcgacgccgatatccgcttttccgccgagcatgagctggcccgccgccggggtggg
ggcgcggtggggcgcagctcgagcatggatttgctgctttag
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