Sphingomonas hengshuiensis: TS85_22255
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Entry
TS85_22255 CDS
T03848
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TS85_22255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_22255
Enzymes [BR:
sphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TS85_22255
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TS85_22255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
AJP73938
UniProt:
A0A7U4JBU0
LinkDB
All DBs
Position
complement(4860165..4861544)
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AA seq
459 aa
AA seq
DB search
MPDPFSDTASARLVAEAVAGDNAAPMSVGELSQRLKRMVEGEFGHVRLRGEISGWKRAAS
GHAYLTLKDADAVIDGVIWRGAAAALPFQPQDGIEVIATGKLTIYPGRSKYQIVIERMEL
AGEGALMALFEKLKARLASEGLFAAERKKPLPYMPRTIGVITSPTGAVIRDILHRLADRF
PSHVLVWPVKVQGEGAALEVARAIRGFDALAPGGAVPRPDLLIVARGGGSIEDLWAFNEE
PVVRAIADCTIPVISAVGHETDTSLADFAADLRAPTPTAAAEFAVPVLADVRHTVSTLAL
RTERCARRYHERAGEKLAALVRVLPRRDALLGPQRQKADDLGARLDRALERRVAAARTRL
DRDAGALRPAMLVQRLAAARQRIEGLSRHLDLVHPNRPLEKGYAWVEARGTHKVVGTAAE
ARGAQAVTLHFRDGAVDARVERPGAKSYAGPASDQPSLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcccttttccgataccgcatcggcgcggctcgtagccgaggcggtggccggc
gacaacgcggcgccgatgagcgtcggcgaattgtcacagcggctgaagcgcatggtcgag
ggcgagttcggccatgtccggctgcgcggcgagatttcggggtggaagcgcgcggcgtcg
ggtcacgcctatctgacgctcaaggatgccgatgcggtgatcgacggcgtgatctggcgc
ggcgccgcggcggcgctgccgttccagccgcaggacgggatcgaagtgatcgcgacgggc
aagctcactatctatcccggccgctccaaataccagatcgtgatcgagcggatggagctg
gcgggcgaaggcgcgctgatggcgctgttcgaaaagctcaaggcgcggctggccagcgag
gggctgttcgcggcggagcgcaagaagccgcttccctatatgccgcgcacgatcggcgtc
atcacttcgcccaccggcgcggtgatccgcgacatattgcatcggctggcggatcgcttt
cccagccatgtcctggtctggccggtcaaggtccagggcgagggcgcggcgctggaggtg
gcgcgggcgatccgcgggttcgacgcgctggcgcccggcggtgcggtgccgcgccccgac
ctgctgatcgtcgcgcgcggcggcgggtcgatcgaggatctctgggcgttcaacgaagag
ccggtggtccgcgcgatcgccgattgcacgatccccgtcatctcggcggtggggcatgag
accgacaccagcctggcggatttcgccgccgatctgcgcgcgccgacgccgactgcggcg
gccgagttcgcggtgccggtgctcgccgatgtccgccacacggtcagcacgctggcgctg
cgcaccgaacgctgcgcgcggcgctatcacgagcgcgcgggcgagaagctcgcggcgctg
gtgcgcgtgctgccgcgtcgcgacgcgctgctcgggccgcagcggcaaaaggccgacgat
ctcggcgcgcggctggatcgcgcactggagcggcgcgtggcggcggcgcggacgcggctg
gatcgcgatgcgggggcgctgcgccccgcgatgctcgtccagcgcctcgcggcggcgcgc
cagcggatcgaggggctgtcgcgccacctcgacctcgtccatcccaatcgcccgctcgaa
aaaggctatgcctgggtcgaggcccgcggcacgcacaaggtggtggggaccgcggccgag
gcgcggggcgcgcaggcagtgacgctgcatttccgcgacggcgccgtcgatgcccgggtt
gagcgtccgggcgccaaatcctatgctggccccgcgtccgaccagcccagcttgttatag
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