Sphingomonas hengshuiensis: TS85_22355
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Entry
TS85_22355 CDS
T03848
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TS85_22355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_22355
Enzymes [BR:
sphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TS85_22355
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TS85_22355
RecFOR pathway proteins
TS85_22355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
nSTAND3
Sigma54_activat
AAA_2
AAA_22
AAA_18
AAA_17
AAA_25
AAA_14
TsaE
Rad17
Bac_DnaA
AAA_28
RNA_helicase
NB-ARC
NTPase_1
AAA_33
AAA_24
ABC_tran
NACHT
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AJP73958
UniProt:
A0A7U4JBU9
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All DBs
Position
4876568..4877587
Genome browser
AA seq
339 aa
AA seq
DB search
MTDDRLLAAARKPEDIDAALRPKNLDDFVGQRAARENLRVFIQAARSRGEALDHVLFFGP
PGLGKTTLAQIVAREMGVGFRATSGPVIAKSGDLAALLTNLEDGDVLFIDEIHRLAPAVE
EVLYPAMEDRALDLMIGEGPSARSVRIDLPRFTLVGATTRQGLLTTPLRDRFGIPVRLQF
YTVEELERVVTRAAALLDLAIAPDGAHEIARRARGTPRIAGRLLRRVRDFANVLGEPVVH
AKAADAALTRLEVDALGLDTMDRRYLMMIADIYRGGPVGVETLAAGLSEARDTIEEVIEP
YLIQIGMIARTARGRCLNAAGWKHLGLDPPPTAQEGLFD
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgatcgcctcctcgccgccgcccggaaacccgaggatatcgacgccgcgctg
cgccccaagaatctcgacgatttcgtcggccagcgcgccgcgcgcgaaaatctgcgggtg
ttcatccaggcggcgcgctcgcgcggcgaggcgctagaccatgtcctgttcttcggcccc
cccggtctcggcaagaccacgctggcgcagatcgtcgcgcgcgaaatgggggtgggcttc
cgcgccacgtcgggcccggtcatcgccaagtcgggcgatctcgccgcgctgctgaccaat
ctcgaggacggcgacgtgctgttcatcgacgagattcaccgcctcgcccccgcggtcgag
gaggtcctctaccccgcgatggaggatcgcgcgctcgacctgatgatcggcgaggggccg
tcggcgcggtcggtgcggatcgacttgccccgcttcaccctggtcggcgcgaccacgcgg
caggggctgctcaccacccccttgcgcgaccggttcggcatcccggtgcggctgcaattc
tatacggtcgaggagctggagcgcgtcgttacccgcgccgcagcactgctcgacctcgcg
atcgcccccgacggcgcgcatgagatcgcccgccgcgcgcgcggcaccccgcgcatcgcc
gggcggctgctgcgccgggtccgcgatttcgccaatgtgctgggcgagcccgtggtccat
gcgaaagccgccgacgccgcgctgactcggctcgaagtcgacgcgctcgggctcgatacg
atggaccggcgctacctcatgatgatcgccgacatttatcgcggcggcccggtcggcgtc
gaaacgctcgccgccgggctcagcgaggcgcgcgacacgatcgaggaagtgatcgagccc
tatctcatccagatcgggatgatcgcccgcaccgcgcgcgggcgctgcctcaacgccgcc
gggtggaagcatctcggcctcgatcccccgcccaccgcgcaggaagggctgttcgactga
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