Sphingomonas hengshuiensis: TS85_22470
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Entry
TS85_22470 CDS
T03848
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TS85_22470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_22470
Enzymes [BR:
sphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TS85_22470
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TS85_22470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
ETF
zf_Rg
DZR
Motif
Other DBs
NCBI-ProteinID:
AJP73974
UniProt:
A0A7U4LGV7
LinkDB
All DBs
Position
complement(4901732..4903897)
Genome browser
AA seq
721 aa
AA seq
DB search
MSRARILVLHPALGPLDYRVPQGMTVEPGAIVVVPIGPRQYAGVVWEPERLPTEEIGDNR
LRNLIAVADAPPIRAPLRRLIEWTADYYLAPLSSVLAMAVRSTAAFEASPTVVEYRATGL
VPDRMTPQREQALERIGERQGLVRELATIADVSDAVIRGLCKVGAIEGVTVDTDSPYPRP
DPAFGPPALNPEQAAVAETLRAAVEARRFQPFLLDGVTGSGKTEAYFEAVAAAIAAGRQT
LVLLPEIALTEPFLKRFAARFGCDPVAWHSGLRTSQRRRAWRAIARGEALVTVGARSALF
LPYADLGLIVVDEAHESSFKQEEGVHYHARDVAVMRGKFESAAVVLASATPAIETRYQVE
LGRYAELKLPGRYGRAELPEIEPIDLIATPPERGRWLAPPLVLAIDATLARGEQSLLFLN
RRGYAPLTLCRHCGHRFQCPNCTAWMVEHRLIRRLSCHHCGHTVPTPEICPECEEPDSLV
ACGPGVERIADEVAALWPDARTAIVTSDTLWSPAKAAEFVHRMEQGEIDIVVGTQLVTKG
YHFPNLTLVGVVDADLGLDGGDLRASERTFQQIMQVSGRAGRGEKPGKVFIQTHAPDAPV
MQALVSGDADSFYAAETEARRDAEAPPFGRYAAIIVSSEDRAAAEETARMIGRTAPQTEA
MHVYGPAPAPLAMLRGRHRYRLLVHARRAFDVQDVIREWLGGLEWGAKVRVAVDVDPYSF
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgcccgcatcctcgtcctccatcccgcgctggggccgctcgattatcgggtg
ccgcagggaatgacggtcgagcccggggcgatcgtcgtcgtccccatagggccccgccaa
tatgccggggtggtgtgggagcccgaacggctgcccaccgaggagattggcgacaaccgg
ctgcgaaacctgatcgcggtcgccgacgccccgccgatccgcgcgccgctgcgccggctg
atcgaatggaccgccgattattatctcgcgcccttgtcctcggtgctggcgatggcggtg
cgctcgaccgcggcgtttgaggcttcgccgacggtggtcgagtatcgcgcgacgggcctc
gtccccgaccgcatgacgccgcagcgcgaacaggcgctcgagcggatcggcgagcggcag
gggctggtgcgtgaactggcgacgatcgccgatgtatccgacgcggtgatccggggcttg
tgcaaggtcggcgcgatcgagggcgtgacggtcgataccgacagcccctatccacgcccc
gaccctgccttcggcccgcccgcgctcaaccccgaacaggcggcggtcgccgaaaccctc
cgcgcggcggtcgaggcgcggcgcttccagcccttcctgctcgacggcgtcaccggatcg
ggcaagaccgaagcctatttcgaagccgtcgcagcggcgatcgcggcggggcggcagact
ttggtgctgctccccgaaatcgcgctgaccgaaccgttcctcaagcggtttgccgcgcgg
ttcggctgcgatccggtggcgtggcattcggggctgcgcacctcgcagcgccgccgcgcc
tggcgggcgatcgcgcggggggaggcgctggtgacggtcggcgcgcggtcggcgctgttc
ctgccctatgccgatctcgggctgatcgtcgtcgacgaggcgcatgaatcgagcttcaag
caggaagagggcgtccattaccacgcgcgcgacgtcgcggtgatgcgcggcaagttcgag
tcggcggcggtggtgctcgcctccgcaaccccggcgatcgagacgcgctaccaggtcgaa
ctgggccgctatgccgagctcaagctgcccggtcgctatggccgcgccgaactgcccgag
atcgagcccatcgacctgatcgcgacgccgcccgagcgcgggcgctggctcgcgccgccg
ctcgtcctcgcgatcgacgcgacgctggcgcgcggcgagcagtcgctcttgtttctcaac
cggcgcggctatgccccactgaccctgtgccgccattgcgggcatcgcttccaatgcccc
aattgcaccgcgtggatggtcgagcaccggctgatccgccggctgtcgtgccaccattgc
ggccacaccgtccccacccccgaaatctgccccgaatgcgaggagcccgacagcctggtc
gcgtgcggccccggcgtcgagcgcatcgccgacgaagtcgcggctttgtggcccgatgcg
cgcaccgcgatcgtcacgtcggacacgctctggtcccccgccaaggccgccgaattcgtg
caccggatggagcagggcgagatcgacatcgtcgtcggcacccagctcgtcaccaagggc
tatcatttccccaacctcacattggtcggggtggtggatgccgatctcgggctcgacggc
ggcgacctgcgcgcctccgaacgcaccttccaacagatcatgcaggtgtcggggcgcgcc
gggcgcggcgaaaagccgggcaaggtcttcatccagacccacgcccccgacgcgccggtg
atgcaggcgctggtcagcggcgacgccgacagcttttacgcggcggagaccgaggcgcgg
cgcgatgccgaggcgccgccctttggccgatacgccgcgatcatcgtgtcgagcgaggac
cgcgccgccgccgaggaaaccgcgcggatgatcggccgcaccgcgccgcagaccgaggcg
atgcacgtctatggccccgcccccgccccgctggcgatgctgcgggggcgccaccgctac
cgcctgctggtccatgcccgccgcgcgttcgacgtgcaggacgtgatccgcgagtggctg
ggcgggctggaatggggggcgaaggtgcgcgtcgccgtggacgtcgatccctatagtttc
ctgtag
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