Sphingomonas hengshuiensis: TS85_23425
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Entry
TS85_23425 CDS
T03848
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sphi
Sphingomonas hengshuiensis
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphi03016
]
TS85_23425
Enzymes [BR:
sphi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
TS85_23425
Transfer RNA biogenesis [BR:
sphi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
TS85_23425
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
AJP74772
UniProt:
A0A7U5BGD7
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All DBs
Position
complement(5131972..5133234)
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AA seq
420 aa
AA seq
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MNVYDGERMAELMAAQGLTAAADAGSADLVVLNTCHIREKATEKVYSDIGRLRKHGKDPM
IAVAGCVAQAEGEEIVRRAKVDVVVGPQAYHNLPQLVADAAAGKAALDTDMPIASKFGAL
PRRRKVGPSAFLTVQEGCDKFCTYCVVPYTRGAEVSRPFAAIVDEAKALVDAGAREITLL
GQNVNAWDDAEGTGLHGLIAALDRIEGLARIRYTTSHPNDMREGLIRAHAEVEKLMPFLH
LPVQSGSDRVLKAMNRSHSRDSYLRILDRVRAARPDIALSGDFIVGFPGETDAEFEATLS
LVDAVGYAQCFSFKYSPRPGTPAADMADQIAAEVMDERLQRLQASLNRHQAAFNAATAGR
TCPVLIERTGKLPGQMLGKSPWLQSVHLLTDAKIGDLIDVEIVRADPNSLSGVQRARVAA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctatgacggcgagcgcatggccgagttgatggccgcgcagggcctgaccgcc
gccgccgacgcgggcagtgccgatctcgtggtgctcaacacctgccacattcgcgaaaag
gcgaccgagaaagtctattcggacatcggccggctgcgcaaacatggcaaggacccgatg
atcgccgtcgccggctgcgtcgcgcaggccgagggcgaggagatcgtccgccgcgccaag
gtcgacgtcgtcgtcggcccgcaagcgtatcacaacctcccccagctcgtcgccgatgcc
gcggcgggcaaggccgcgctagacaccgacatgccgatcgccagcaagttcggcgcgctc
ccccggcgacgcaaggtcggcccctcggccttcctgaccgtgcaggaagggtgcgacaaa
ttctgcacctattgcgtcgtcccctatacccgcggcgccgaagtcagccgccccttcgcg
gcgatcgtcgacgaggcaaaggcgctggtcgatgccggcgcgcgtgagatcacgctgctg
gggcagaacgtcaatgcatgggacgatgccgagggcaccgggctccacgggctgatcgcc
gcgctcgaccggatcgaggggctggcgcgcatccgctataccaccagccaccccaacgac
atgcgcgaagggctgatccgcgcgcatgccgaggtcgaaaagctgatgccgttcctgcat
ttgccggtccagtcgggcagcgaccgggtgctcaaggcgatgaaccgcagccacagccgc
gactcgtacctgcgcatcctcgaccgcgtccgcgccgcgcggcccgacatcgcgctgtcg
ggcgacttcatcgtcggcttcccaggcgaaaccgatgccgagttcgaagcgacgctcagc
ctcgtcgacgcggtcggctatgcccagtgcttcagcttcaaatacagcccccgccccggc
acccccgccgccgacatggccgatcagatcgcggcggaggtgatggacgagcgcctccag
cggctccaggcatcgctcaaccggcatcaggccgccttcaacgccgcgacggcggggcgg
acctgcccggtgttgatcgaacggacgggcaagctccccggccagatgctcggcaagtcg
ccctggctgcaatcggtccatctgctgaccgatgcgaagatcggcgacctgatcgacgtc
gaaatcgtccgcgccgaccccaattcgctgagcggggtgcagcgggcccgcgtcgccgcc
tag
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