Tardibacter chloracetimidivorans: BSL82_00500
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Entry
BSL82_00500 CDS
T04967
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sphj
Tardibacter chloracetimidivorans
Pathway
sphj03410
Base excision repair
sphj03430
Mismatch repair
sphj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSL82_00500
03430 Mismatch repair
BSL82_00500
03440 Homologous recombination
BSL82_00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphj03400
]
BSL82_00500
DNA repair and recombination proteins [BR:
sphj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BSL82_00500
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BSL82_00500
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BSL82_00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
GHMP_kinases_C
Motif
Other DBs
NCBI-ProteinID:
API57969
UniProt:
A0A1L3ZQR6
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Position
97927..99684
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AA seq
585 aa
AA seq
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MSASSHVFGVKQSILGQPWRWRGGAADGLELTGIETQLYLSRGCPNDDLERHRTPTIRAW
MPDPSIFQDMDTAARRIAAAIEAGERIVVFGDYDVDGATSAALLIRLLRAAGAEAGYYIP
DRLMEGYGPSAEALVRLGREGAGLIVTVDCGAQAFEALSAARDSGVEVIVVDHHQCSTAL
PPAVAIVNPNRLDETDGAAHGHLAAVGVAFLLAAAVVRELRSRGRFRTMAEPNLLEWLDI
VALGTVADVVALKGLNRAFVAQGLKVMANRRNVGLAALMDAARLTKPPSATDLGFALGPR
INAGGRVGKSDLGVRLLTTQDPEEAAAIAEELNRLNEERRALEALVLEQAEAAAVRTGNA
SVAVVSGAGWHPGVIGIVAGRLKERLNKPAIVIGLDEAGVGKGSGRSISGVDLGAAVIAA
RESGLLSAGGGHAMAAGLTVEEGRIAELSGFLEDRLAAAVARAREAAALMLDCAVAPRGV
SIDLAETLEGAGPYGSGWPSPRVAAGPFGVVSCDVVGQGHVRAILAGQDGGRLKAMAFRH
GETQLGAALLAARGRKLYVAGRVKRDDWGTRPQAEMHLDDAAWAD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgtctcacgtctttggtgtcaagcagtctatccttggtcagccgtggcgc
tggcgcggcggggcggcggatggccttgagcttaccgggatcgaaacccagctctatctt
tcacgcgggtgcccgaatgacgacctggagcggcaccgcacgccgacgatccgcgcatgg
atgccggacccttcgatctttcaggacatggacacagccgcccgccgcatcgccgccgcg
atcgaggcgggcgagcgcatcgtcgtcttcggcgactatgacgtggacggcgctacatcg
gccgcgctgttgatccggctgttgcgggcggcaggggccgaggcgggctattatatcccc
gaccggctgatggaaggctatggcccatcggccgaggcgctggtgcggctggggcgggaa
ggcgcggggcttatcgtcaccgtcgattgcggcgcgcaggcgttcgaggcgctctcggcc
gcaagggacagcggcgtggaggtgatcgtcgtcgaccatcatcaatgttccaccgcgctt
ccgcccgccgtcgcgatcgtcaaccccaacaggctggacgaaacggacggcgcggcccat
gggcatctggcggcggtgggcgtcgcctttcttctggcggccgccgtagtgcgggagttg
cggtcgcgcggccggttcaggacgatggccgagcccaatctgcttgagtggctggatatc
gtcgcgctgggcaccgtcgccgatgtcgtggcgctgaaggggttgaaccgcgcctttgta
gcgcaggggctgaaggtgatggccaaccggcgaaatgtgggcctcgcggcgctgatggac
gcggcgcggttgaccaagccccccagcgcgaccgatcttgggtttgcgcttgggccgcgc
atcaacgccggcgggcgggtcggcaaatcggatctgggtgtcaggctcctcaccacccaa
gaccccgaggaagcggcagccatcgccgaggaactcaaccggctgaacgaggaacgccgt
gcgcttgaggcgctggttctagaacaggcggaagcagcggcggtgcgcaccggcaacgcc
agcgtcgccgtggtgtccggagccggctggcatccgggcgtcatcggcattgtcgcgggg
cggttgaaggaacggctcaacaagcctgcaatcgtcatagggctggacgaggcaggcgtg
ggcaagggttctggccgctccatctccggggtcgatctgggcgcggccgtcatcgctgcg
cgcgaaagcggccttctgtcggcgggcggcggtcatgccatggcggcgggcctgacggtg
gaggaaggcaggatagcggagctgtccggttttctggaggacaggcttgccgctgccgtc
gcgcgcgcaagggaagcggccgcgctgatgctggattgcgccgtcgcgccacgcggggtt
tcgatcgacctcgctgaaacgctggagggcgccgggccttatggctccggctggccatcg
ccacgggttgcagcgggtccattcggcgtcgtgagctgcgatgtcgtgggacagggccat
gtccgcgccattctggcggggcaggatggcggacggctgaaggctatggcgttccgccac
ggcgagacccagctgggcgcggcgctgctcgcggcgcgcggacgcaagctctatgtcgcc
gggcgtgtgaagcgggatgactggggcacgaggccgcaggcggaaatgcatctggacgac
gctgcctgggccgattga
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