Tardibacter chloracetimidivorans: BSL82_00930
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Entry
BSL82_00930 CDS
T04967
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sphj
Tardibacter chloracetimidivorans
Pathway
sphj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSL82_00930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphj03021
]
BSL82_00930
03400 DNA repair and recombination proteins [BR:
sphj03400
]
BSL82_00930
Enzymes [BR:
sphj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSL82_00930
Transcription machinery [BR:
sphj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSL82_00930
DNA repair and recombination proteins [BR:
sphj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSL82_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
API58039
UniProt:
A0A1L3ZQY5
LinkDB
All DBs
Position
169462..173619
Genome browser
AA seq
1385 aa
AA seq
DB search
MATQIAPTTAGAKAAGNVTARKRIRKVFGDIHEVVQMPNLIEVQRESYEQFLRSRPADGY
VSGLEKTLRSVFPIRDFAGTAELDFVFYELEDPKYDVDECRQRGMTFAAPMRVTLRLIVF
EVDPDTEARSVLDIKEQDVYMGDMPLMTQNGTFIVNGTERVIVSQMHRSPGVFFDHDRGK
THSSGKYLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTSLLYALGMNSEEILNH
FYNRVSWARDPNGWRVPFEPEQWRGQKPMFDVVNAETGEVAFPLGQKVSPRAAKKAQTDG
LKELLIPTEEIFGRYSAYDLINETTGEIYIEAGDELSAENLERLDKAGFDKIELLDIDHV
NVGPWIRNTLMADKAEERDQALSDIYRVMRPGEPPTRETAEALFAGLFFDPERYDLSAVG
RVKMNMRLELDCPDDVTTLRTEDILSVIKTLVDLKDGKGEIDDIDNLGNRRVRSVGELLE
NQYRVGLLRMERAVKERMSSVDISTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPL
SEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFSRV
NKYGFIETPYRKIVGGKVTDEVVYLSAMEEAKHTIAQANAELDGEGSFVEELISAREAGE
FLMAPREQITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVG
TGMEATVARDSGAAITAKRTGIVDQVDATRIVVRATEETEAGKTGVDIYTLMKFQRSNQN
TCINQRPLVKVGDLVARGEVIADGPSTELGELALGRNVLVAFMPWNGYNYEDSILISERI
VKDDVFTSIHIEEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVEPGDI
LCGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTVVEVRVFNRHGIDKD
ERALAIEREEIDRLTKDREDERAILNRATYTRLREVLLGQTAAAAPKGVKKGGVIDDELL
DSVEKREWWKFAVADDKVQSDLEAMHGAWEEAQTNLQKRFEDKVEKLQRGDELPPGVLKM
VKVFVAVKRKLQPGDKMAGRHGNKGVISRILPVEDMPFLEDGTHVDIVLNPLGVPSRMNV
GQIFETHLGWAARGLGKQIGALLEDINSKAQGLDSGDATRVRDQLKSIYGKAYHAEIDAQ
SNEDLLELAANVKGGVPMATPVFDGAREADVSEMLELAGLDSSGQVELYDGRTGEQFDRK
VTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAA
YTLQEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELTNAEV
VDDAA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccagatagccccaacgaccgcaggcgcgaaggccgccggcaacgtgacggca
aggaagcgcatccgcaaggttttcggcgacatccacgaagtggtgcagatgccgaacctg
atcgaggtgcagcgcgagagctacgagcagttccttcgctcgcggccggccgacggctat
gtgtcggggcttgagaagaccctgcgctcggtgtttccgatccgggatttcgcgggtacc
gcagagctggatttcgtcttctacgagctggaagaccccaaatacgatgtcgatgaatgc
cgtcagcggggcatgacctttgccgcgccgatgcgcgtcacgctgcgcctgatcgtgttc
gaggtcgatcccgatacggaagcccggtccgtgctcgatatcaaggagcaggacgtctac
atgggcgacatgccgctgatgacgcagaacggcacgttcatcgtcaacggcaccgaacgc
gtgatcgtgtcgcagatgcaccggtcgccgggcgtattcttcgaccatgaccgcggcaag
acgcattcgtcgggcaaatatctgtttgcggcgcgcgtgatcccctatcgcggctcctgg
ctcgatttcgagttcgacgccaaggacatcgtcaacgtccgcatcgaccgcaagcgcaag
ctgccggtgacgtcgctgctctatgcgctgggcatgaattccgaggaaatcctcaaccac
ttctacaaccgcgtcagctgggcgcgtgatccgaacggctggcgcgtgccttttgagccg
gagcagtggcgcggccagaagccgatgttcgacgtcgtcaacgccgagacgggcgaagtc
gcctttccgctgggccagaaggtgtcgccgcgcgccgccaagaaggcgcagaccgacggg
ctgaaggaactgctgatcccgaccgaggaaatcttcggccgctattccgcctatgatctc
atcaacgagaccaccggcgaaatctatatcgaggcgggcgacgagctttcggccgaaaac
ctcgaaaggctggacaaggcgggcttcgacaagatcgagctgctcgacatcgaccatgtc
aatgtcggtccgtggatccgcaacacgctgatggccgacaaggccgaggagcgcgaccag
gcgctcagcgacatctatcgcgtgatgcgtcctggcgaaccgccgacgcgcgagaccgcc
gaggcgctgttcgcggggctgttcttcgatcccgaacgctatgacctgtcggccgtcggc
cgcgtcaagatgaacatgcgtctggagctggactgcccggacgatgtgacgacgctgcgc
accgaagacattctttcggtcatcaagaccctggtcgacctgaaggacggcaagggcgag
atcgacgacatcgacaatctgggcaaccgccgcgtccgttcggtgggcgaactgctggaa
aaccagtatcgcgtcggactgctgcgcatggaacgcgcggtgaaggagcggatgtcctcg
gtcgacatctcgaccgtgatgccgaacgacctgatcaacgccaagccggcggtggccgcg
gtgcgcgagttcttcggctcgtcgcagctgtcgcagttcatggaccagaccaatccgttg
tcggaagtcacccacaagcgccgcgtgtcggcgcttgggccgggcggcctcacgcgcgag
cgcgccggcttcgaggttcgcgacgtccatccgacgcactatggccgcatctgcccgatc
gaaacgccggaagggccgaacatcggcctgatcaactcgctggcgacgttcagccgggtg
aacaaatacggctttatcgagacgccctatcgcaagatcgtgggcggcaaggtcaccgac
gaggtggtctatctgtcggcgatggaagaggccaagcacacgatcgcccaggcgaacgcg
gagctggacggcgaggggagcttcgtcgaggaactgatctcggcgcgtgaggcgggcgag
ttcctgatggcgccgcgcgagcagatcacgctgatggacgtgtcgcccaagcagctcgtg
tccgttgcagcgtcgcttatcccgttcctggaaaacgatgacgccaaccgcgcgctgatg
ggttccaacatgcaacgccaggccgtgccgctggtgcgcgccgaagcgcccttcgtcgga
accggcatggaagcgaccgtggcgcgcgattcaggcgccgcgatcactgccaagcggacg
ggcatcgtcgatcaggtggacgccacccgcatcgtcgttcgcgccacggaagagaccgag
gcgggcaagaccggagtcgacatctacacgctgatgaagttccagcgttcgaaccagaac
acctgcatcaatcagcgcccgctggtgaaggtgggcgatctggtggcccggggcgaggtg
atcgccgacggtccttcgaccgagctgggcgaactggcgctggggcgcaacgtgctggtc
gcgttcatgccctggaacggatacaattatgaggattccatcctgatctcagagcggatc
gtgaaggacgacgtcttcacctcgatccacatcgaggagttcgaggtgatggcccgcgac
accaagctcgggccggaagatatcacccgcgacatcccgaacgtgggcgaggaagcgctc
aggaacctggacgaggcgggcatcgtctatatcggcgcagaggtggagccgggcgatatc
ctgtgcggcaagatcacgccgaagggcgaaagcccgatgacgccggaagaaaagctgctc
cgcgcgatcttcggtgaaaaggcgtcggacgtgcgcgacacctcgctgcggctgccgccg
ggcgtggcgggcaccgtggtcgaagtccgggtgttcaaccgccacggcatcgacaaggac
gagcgcgcgcttgcgatcgaacgtgaggagatcgaccgcctgacgaaggaccgcgaggac
gagcgcgccattctgaaccgcgcgacctacacgcggcttcgcgaagtgctgctggggcag
accgccgcggccgcgcccaagggtgtgaagaagggcggcgtgatcgacgacgagctgctc
gacagcgtcgaaaagcgcgaatggtggaagttcgcggtggccgacgacaaggtccagtcc
gacctggaagccatgcatggcgcctgggaagaggcgcagaccaacctgcagaagcggttc
gaggacaaggtcgagaagctgcagcgcggcgacgagctgccgccgggcgtgctgaagatg
gtgaaggtcttcgtcgcggtgaagcgcaagctgcagccgggcgacaagatggccggccgt
cacgggaacaagggcgttatctcgcgcattctcccggtcgaggacatgccgttccttgag
gacggcacgcatgtcgacatcgtgctgaacccgcttggcgtgccgagccggatgaacgtg
ggccagatcttcgaaacgcatctgggctgggccgcgcgcggtctgggcaagcagatcggc
gcattgctggaagacatcaacagcaaggcgcaggggctggacagcggcgacgcgacgcgg
gtccgcgaccagctcaagtcgatctacggcaaggcctatcatgcggagatcgacgcgcag
agcaacgaggacctgctggaactcgccgccaatgtgaagggcggcgtgccgatggcgacc
ccggtgttcgacggtgcgcgcgaggcggacgtgtcggagatgctggaactggccgggctc
gacagctcgggtcaggtcgagctgtacgatggccgcacgggcgagcagttcgaccgcaag
gtgactgtcggctacatctatatgctgaagctgcaccatctggtggacgacaagatccac
gcccggtcgatcggaccgtacagcctcgtcacccagcagccgctgggcggcaaggcacag
ttcggcggccagcgcttcggcgaaatggaggtctgggcgcttcaggcctatggcgctgca
tataccttgcaggaaatgctgacggtgaaatccgacgacgtggtcggccgcaccaaggtc
tatgaagcgatcgtcaagggcgacgataccttcgaggccggcattccggagagcttcaac
gtgctcgtcaaggaaatgcgttcgcttggcctcaatgtcgagctgaccaacgccgaagtc
gtcgacgacgccgcttaa
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integrated database retrieval system
