Tardibacter chloracetimidivorans: BSL82_00935
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Entry
BSL82_00935 CDS
T04967
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sphj
Tardibacter chloracetimidivorans
Pathway
sphj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSL82_00935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphj03021
]
BSL82_00935
03400 DNA repair and recombination proteins [BR:
sphj03400
]
BSL82_00935
Enzymes [BR:
sphj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSL82_00935
Transcription machinery [BR:
sphj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSL82_00935
DNA repair and recombination proteins [BR:
sphj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSL82_00935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
API58040
UniProt:
A0A1L3ZQZ9
LinkDB
All DBs
Position
173677..177939
Genome browser
AA seq
1420 aa
AA seq
DB search
MNQELMNFMNPAAKPETFDQIQIGLASPERIRSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIVCEKCGVEVTVSKVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMPLKDLERVLYFENYIVIEPGLTPLTKFQLLNEDELMEAQDEHGEDAFTA
GIGAEAVRKLLEELDLEGEKVQLLEELATTKSELKPKKIIKRLKVVESFLESGNRPEWMV
LNVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRM
LQESVDALFDNGRRGRTITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMELEGEPGEGMLLSDMVEVHQALN
VGAVTLHSKITSRVPQTDEDGNTYMKRAQTTPGRMLIGETLPKSHKVPFDVVNRLLTKKE
IGDVIDTVYRHTGQKETVLFADAIMALGFRHACSAGISFGKDDMVIPPEKEEMVSETKTL
VKDFEQQYQDGLITQGEKYNKVVDAWARCGDRVADAMMKRISSKQKLDNGREKPINAIYM
MAHSGARGSQAQIKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVSQDCVVIEEDCGTERALETRAIIEGGTTIVSLAERILGRTV
AEDIIDTKTNETVIPLGTLLDEAAVALVEAVGVPVVKIRSPLICESKTGVCAACYGRDLA
RGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQVSEQSTLEAPVDGTLEYRNMPT
IVDGRGRRVSLSRAGEIAIIDSEGRERATFRIPYGATLQFESGHIVSKGERMAEWDPYTL
PIITESAGTVKYQDLIEGQSLEEQVDEATGITNKVVVDWRARSNKKDDLRPRITLLDENS
GEAARYLLSVDSILSVNEGQRVEAGDVIARIPREAAKTRDITGGLPRVAELFEARKPKDN
AIIARVSGRVEFGKDYKAKRRIILRPEDPSQEPIEYLVPKGKHMTVQEGDFIQRGDYLID
GNPDPHDILDVLGVEALAEYLVAEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITESGDT
TLLVGEQVDREEMDEINAKAAAEGRKLADGKPVLLGITKASLQTRSFISAASFQETTRVL
TEASVQGKIDTLNGLKENVIVGRLIPAGTGAAMSRLRVTANSRDAALRAAQRARQPALTE
RDDNVVTAEELVSRDEPGELAYGQDPLAAVAGAGENEGEE
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaactgatgaacttcatgaaccccgcggcgaagccggagacgtttgaccag
atccagatcggactggcttctccagaacgcatccggagctggtcctacggcgagatcaag
aagccggagacgatcaactaccgcaccttcaagccggagcgggacggcctgttctgcgcg
cgcatctttggtccgatcaaggactatgaatgcttgtgcggcaagtacaagcgcatgaaa
tacaagggcatcgtctgcgaaaaatgcggtgtcgaagtcacggtttccaaggtccgccgc
gagcggatgggccatatcgagcttgcggccccggtggcgcatatctggttcctgaagtcg
ctgccgtcgcgcatcggcctgctgctggacatgccgctgaaggaccttgagcgcgtcctc
tattttgaaaactatatcgtcatcgaacccggcctgacgccgctcaccaagttccagctt
ctcaacgaagacgagctgatggaagcgcaggacgagcatggcgaggacgccttcaccgcc
ggcatcggcgctgaagccgtacgcaagctgcttgaggaactcgacctcgagggcgagaag
gtacagctcctcgaagaactggccacgaccaagtcggagctgaagccgaagaagatcatc
aagcggctgaaggttgtcgaaagcttcctcgaatccggcaaccgtccggagtggatggtg
ctgaacgtcgttccggtcatcccgcccgaactgcgtccgctggtgccgctcgacggcggc
cgtttcgcgacgtcggatctgaacgacctctatcgccgcgtgatcaaccggaacaaccgt
ctgaagcggctgatcgaactgcgtgcgcccgacatcatcgtccgcaacgaaaagcgcatg
cttcaggagtcggtcgatgcgctgttcgacaatggccgtcgtggccgcaccatcacgggc
gccaacaagcggccgttgaaatcgctcagcgacatgttgaagggcaagcagggccggttc
cgtcagaacctgctcggcaagcgcgtcgactattcgggccgctcggtcatcgtgaccggc
cccgaactgaagctgcatcagtgcggcttgcccaagaagatggcgctggagctgttcaag
cccttcatctacgcccgtctcgacgccaagggcctgtcgatgacgctgaagcaggcgaag
aaatgggtggaaaaagagcgcaaggaagtctgggacatcctcgacgaggtgatccgcgaa
catcccgtgcttctgaaccgcgcgccgacgcttcaccgtctcggcatccaggcgttcgag
ccagtgctgatcgaaggcaaggcgatccagcttcacccgctggtgtgctcggccttcaac
gccgacttcgacggcgaccagatggccgtccatgtgccgctgagccttgaagcgcagctt
gaggcgcgcgtgctgatgatgtcgaccaacaacatcctcagccccgcgaacggcaagccg
atcatcgtgccgtcgcaggacatggtccttggcctctattatctgtcgatggaactcgaa
ggcgagccgggcgaaggcatgcttctgagcgacatggtggaggtccatcaggcgctgaac
gtgggcgcggtgactctgcactccaagatcaccagccgcgttccgcagacggacgaggac
ggcaacacctatatgaagcgcgcccagaccacgcctggccgcatgctcatcggtgaaacg
ctgccgaagagccacaaggtgccgttcgatgtggtcaatcgccttctcacgaagaaggag
atcggcgacgtcatcgataccgtctatcgccacaccggccagaaggagacggtgctgttc
gccgacgcgatcatggcgcttggcttccgtcacgcctgttcggcgggtatctcgtttggc
aaggacgacatggtcattccgcccgaaaaggaggaaatggtcagcgaaaccaaaaccttg
gtgaaggactttgagcagcagtatcaggatggcctgatcacccagggcgagaagtacaac
aaggtcgtggacgcctgggcacgctgcggtgaccgcgtggccgacgcgatgatgaagcgc
atttcgtccaaacagaagctggataacgggcgtgaaaagccgatcaatgccatttacatg
atggcgcattccggcgcgcgcggcagccaggcccagatcaagcagcttgccggcatgcgc
ggcctgatggccaagccgagcggtgaaatcatcgagacgccgatcatctcgaacttcaag
gaagggctgaccgtccttgaatatttcaactccacgcacggcgctcgcaagggtctggcc
gacaccgcgttgaaaacggccaactccggctatctcacccgccgactggtggacgtaagc
caggattgcgtcgtcatcgaggaggattgcggcaccgagcgcgcgcttgaaacccgcgcg
atcatcgaaggcggcacgaccatcgtgtcgcttgccgaacgcatcctgggccgtactgtc
gccgaggacatcatcgacaccaagaccaatgagacggtcatcccgctgggcaccctgctg
gatgaggcggctgttgccctggttgaggcggtgggcgttcctgtcgtcaagatccgcagt
ccgctgatctgcgaatccaagacgggcgtgtgcgccgcctgttatgggcgcgatctcgcg
cgcggtacgccggtgaacatgggcgaagcggtcggcgtgatcgcggcccagtcgatcggt
gagccgggcacgcagcttacgatgcggaccttccacatcggcggcgcggcgcaggtgtcc
gaacagtcgacgctggaagcgccggtggacggcacgctcgaatatcgcaacatgccgacg
atcgtcgacggtcgcggccgccgtgtatcgctgtcgcgtgccggtgaaatcgcgatcatc
gacagcgagggccgtgaacgggcgaccttccgcattccctatggcgcgacgctccagttc
gagagcggtcacatcgtgtccaagggcgagcggatggccgaatgggatccgtacacgctg
ccgatcattaccgagagcgccggtacggttaagtaccaggacctgatcgagggtcagtcg
cttgaagagcaggtggacgaagccaccggcatcaccaacaaggtggtggtggattggcgc
gcccgttccaacaagaaggacgatctgcgcccgcgcatcaccttgctggacgagaattcc
ggcgaggcggcacgctatctgctgtcggtggactcgatcctctcggtcaacgaggggcag
cgggtggaagcaggcgacgtgatcgcgcgtattccgcgtgaagccgcaaagacacgcgac
atcaccggcggtctgccgcgggtggccgagctgttcgaggcgcgcaagcccaaggacaac
gcgatcatcgcgcgcgtttccggccgggtcgagttcggcaaggattacaaggccaagcgc
cggatcatccttcgtcctgaagacccgtcgcaggagccgatcgagtatctggtgcccaag
ggcaagcacatgaccgtgcaggaaggcgacttcatccagcgcggcgattacctgatcgac
ggcaaccccgatccgcacgacatccttgacgtgctgggcgtggaagcgctggccgaatat
ctggtggcggagattcaggaagtctaccggctccagggcgtgaagatcaacgacaagcac
atcgaggtgatcgtccgccagatgctgcagaaggtcgagatcaccgaatcgggggacacc
acgctgctggtcggcgagcaggtggaccgcgaggagatggacgagatcaacgccaaggcc
gccgccgagggtcgcaagcttgccgacggcaagccggtgttgctgggcatcaccaaggcc
tcgctccagacccggtcgttcatttcggcggcgtcgttccaggagacgacgcgcgtgctg
accgaagcgtctgtccagggcaagatcgacacgctcaacggcctgaaggaaaacgtcatc
gtcgggcgtctgataccggcgggtacgggcgctgcgatgagtcgccttcgcgtcaccgcc
aacagccgcgacgccgcccttcgcgccgcgcaacgcgcccggcaaccggcgttgaccgaa
cgcgacgacaatgtcgtaacggcggaagagcttgtgtcccgtgacgagccgggggaactg
gcctatgggcaggacccgctggctgcggtcgcgggtgcgggcgagaatgagggcgaggaa
taa
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integrated database retrieval system
