Tardibacter chloracetimidivorans: BSL82_01450
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Entry
BSL82_01450 CDS
T04967
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sphj
Tardibacter chloracetimidivorans
Pathway
sphj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSL82_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphj03019
]
BSL82_01450
03009 Ribosome biogenesis [BR:
sphj03009
]
BSL82_01450
Enzymes [BR:
sphj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSL82_01450
Messenger RNA biogenesis [BR:
sphj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSL82_01450
Ribosome biogenesis [BR:
sphj03009
]
Prokaryotic type
rRNA helicases
BSL82_01450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
API58129
UniProt:
A0A1L3ZR76
LinkDB
All DBs
Position
complement(265869..267590)
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AA seq
573 aa
AA seq
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MSFASLPVAIAQALADRGYAEPTPVQAEVLKAEADDRDLLVSAQTGSGKTVAYGLALART
LLGEAERLPPAREPLALIIAPTRELALQVQRELDWLYAKAGARVVSCVGGMDMRREQRTL
GQGAHIVVGTPGRLRDHLERGSLVPTHLRAVVLDEADEMLDLGFRDDLEEILDATPAERR
TLLFSATLPKPIVTLAKRFQKDALRIATIGSDQPHGDIEYRAIRIAPGDLEHAIVNVLRF
FEAGGAMIFCATREGVRRLHASLVERGFAAVALSGELSQSERNHALQALRDRRARVCVAT
DVAARGIDLPDLGLVIHAELPHDAETLQHRSGRTGRAGRKGICILLVPYPKRRRAEGMLR
AARVNAQWVAPPSIDEIRARDQERLLESVSQTGDAAEEDLVVARQLLEQRSAEEIAAALI
RVHRQRLPAPEELFDSGPDTGGGQAGRNVRDSGPRAGFEDTVWFRMNIGRNNNADPRWLL
PLLCRRGHITKHEVGAIRIFDRETRFEIPSAIAGKFVAALKRTGESDDGVAIEPLPQGAG
LPPRQHRPKPGPDRFRPTGRPGGKPGGRPAARR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgccagtctccccgttgcgatcgcccaggcgcttgccgatcgcggttatgcg
gagccgacacccgttcaggcggaggtgctgaaagccgaagcggacgaccgcgacctgctg
gtttccgcgcagacgggctctggcaagaccgtcgcctatggccttgcgctggcccgcaca
ttgcttggcgaggcggagcggctgccgcccgcccgggagccgctggcgctgatcatcgcg
cccacgcgcgaacttgcgctccaggtgcagcgcgaacttgactggctgtatgcaaaggcc
ggcgcgcgggtcgtctcctgcgtcggcggcatggacatgcggcgcgaacagcgcaccctt
ggccagggcgcgcatatcgtcgtcgggacaccgggccgtctgcgcgaccatctcgagcgt
ggaagccttgtgcccacccatttgcgcgccgtcgtcctggacgaggccgacgagatgctg
gaccttgggtttcgggacgatctggaagagattctcgacgccaccccggcggagcggcgc
acgctgctgttctcggccaccctcccgaagccgatcgtcacgcttgccaaaaggttccag
aaggatgcgctgcggatcgccaccatcggcagcgaccagccgcatggcgatatcgaatac
cgcgcaatccgcatcgcgcccggcgacctagagcatgccatcgtcaacgttctgcgcttt
ttcgaggcgggcggcgcgatgatattctgcgccacccgcgagggcgttcggcggctgcac
gccagcctggtcgagcgcggcttcgcggccgtcgcgctgtcgggtgaattgagccagagc
gagcgcaaccatgcccttcaggcgcttcgcgaccggcgcgcgcgggtctgcgttgcgacc
gatgtcgccgcgcgcggcatcgacctgcccgacctcggtctcgtcatccacgccgaactg
ccccacgacgccgaaacgctccagcaccgttccggccggacaggccgcgccggcagaaag
ggcatctgcatcctgctggtcccctaccccaagcgccgccgcgccgaaggaatgcttcgc
gccgcccgggtgaacgcccagtgggttgcgccgccttcgatcgatgagatccgcgcccgc
gaccaggagcggctgcttgaatcggtatcgcagacaggagatgccgcggaagaggatctg
gtggtggcccgccagcttctggagcagcggagcgccgaggaaatcgccgcagcgctcatc
cgcgtccaccgccagcggctgcccgctcccgaagagttgttcgacagcggaccggatacg
ggcggcggccaggcgggacgcaacgtccgcgacagcgggccgcgcgcaggatttgaggac
acggtctggttccggatgaacatcgggcgcaacaacaacgccgacccgcgctggctcctg
ccgctgctctgccgccgaggccatatcaccaagcatgaggtgggcgcgattcgcatcttc
gaccgcgaaacccggtttgagattcccagcgcgatcgcgggcaagttcgtggcggcgctg
aagcgcacgggcgagtccgacgatggcgtggcgatcgagcccttgccgcagggcgcggga
ctgccgccccggcagcatcgccccaagccaggccccgaccgcttccgtccgaccggcaga
cccggcggcaagcccggcggacgacctgccgcccggcggtga
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