Tardibacter chloracetimidivorans: BSL82_01720
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Entry
BSL82_01720 CDS
T04967
Name
(GenBank) MBL fold hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sphj
Tardibacter chloracetimidivorans
Pathway
sphj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSL82_01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphj03019
]
BSL82_01720
Messenger RNA biogenesis [BR:
sphj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSL82_01720
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Ortholog
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B_2
Lactamase_B
RNase_J_C
RsbRD_N
Motif
Other DBs
NCBI-ProteinID:
API58176
UniProt:
A0A1L3ZRC1
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Position
complement(323447..325093)
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AA seq
548 aa
AA seq
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MVPGDELIFLPLGGSGEIGMNVNLYGCRGKWLMVDLGLTFGDPTVPGIDLVLPDLAFIEE
RRNDLLGVVLTHGHEDHIGAIPYLVEDLGDVPLYATPFTASLIRSKLEEEGIANRVKLNI
IELGGTVNLGPFSCRYVALAHSIPEGNALLIDTPFGKVFHTGDWKLDEDPVLGSPSTAAE
LTAIGAEGVLAVIGDSTNVFNPEASGSESDVRADLDQIIADAPGRVVVTTFASNAARLHT
LGQVARDTGRELAIAGRSLERITKAAKSVGYLTDFPETIDFDTAMNLPRDQVMIIATGGQ
GEPMAALGRIAGNNHPIKLTAGDTVVFSSKQIPGNEIAIGRIQNQLAEAGVQMVTDRQAL
IHVSGHPGRPELAAMYGWLKPHIVVPVHGEMRHMVEHARLALAQGVPETVVPKNGSVIRL
APGAPQVISHEKVGRLVLDGDVILPADGATINARRRISVHGYMAVTVVLGRNGKLAAAPV
VTAQGVPVEEDRDAFLEEVREKLAATVKSDGDKSDDRFREALRLAARRTATAWTGKKPIM
EVSIVRLD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggttcctggtgacgagctgatcttcctgccgctcggcgggtcgggcgagatcggaatg
aacgtcaatctatacggttgtcgcggcaagtggctgatggtggatctgggccttacattc
ggtgatccgaccgtgccgggcatcgatctggttttgcccgatctcgccttcatagaggaa
cggcgcaacgacctgctgggcgtggtgctgacccatggccatgaagatcacatcggcgcg
attccctatctggtggaggatctgggcgatgtgccgctttacgccacgcccttcacggcc
tctctcatccggtccaagctggaggaagagggcatcgccaaccgggtgaagctgaacatc
atcgagcttggcgggactgtgaacctggggccgttctcgtgccgctatgtcgcgcttgcc
cattcgattccggagggcaatgcgctgttgatcgacacgcccttcggcaaggtgttccac
accggtgactggaagctggacgaggatccggtgctcggctccccctccaccgccgcggag
ttgaccgccatcggcgcggaaggcgtgcttgcggtgatcggcgactccaccaacgtcttc
aatcccgaggcgtccggatcggagagcgatgtgcgcgccgatctggaccagatcatcgcg
gatgcgccgggccgggtggtggtgaccacctttgcgtcgaacgcggcccgccttcacacg
ctgggccaggtcgcccgcgacaccggtcgcgagcttgcgatcgccggtcgttcgctggag
cggatcacgaaggcggcaaaaagcgtcggctacctcaccgactttcccgaaacgatcgac
ttcgacacggcgatgaacctgccgcgcgatcaggtgatgatcatcgcgaccggcgggcag
ggggagccgatggccgcgcttggccggattgcgggcaacaaccatccgatcaagctgacg
gcgggcgatacggtcgtcttttcgtcaaagcagataccgggcaatgaaatcgccatcggg
cgcatccagaaccagctggccgaggcgggcgtgcagatggtgacggaccgccaggccctg
atccatgtgtcgggccatccgggccgtccggagcttgccgccatgtacggctggctgaag
ccgcatatcgtcgtgccggtgcatggcgagatgcggcatatggtggaacatgcccgtctt
gcgctggcgcagggcgtcccggaaacggtggtgccgaagaacggttccgtgatccgtctc
gcgccaggcgctccccaggtgatcagccatgagaaggtgggtcgactggtgctggacggc
gacgtcatcctgcccgccgatggtgcgacgatcaacgcccgccgccgcatttccgtgcac
ggctatatggcggtcacggtcgtgcttggccgcaacggcaaactggcggccgcccccgtg
gtgacggcgcaaggcgtccccgtggaggaggatcgggacgcctttcttgaggaagtgcgc
gagaaactcgccgctaccgtcaaatccgatggcgacaagagcgacgacaggttccgcgag
gcgttgcgccttgccgcccgccgcaccgccaccgcatggaccggcaagaagccgatcatg
gaagtcagcatcgtcaggctggactga
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