Tardibacter chloracetimidivorans: BSL82_05405
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Entry
BSL82_05405 CDS
T04967
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sphj
Tardibacter chloracetimidivorans
Pathway
sphj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BSL82_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphj03400
]
BSL82_05405
DNA repair and recombination proteins [BR:
sphj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BSL82_05405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
API58811
UniProt:
A0A1L3ZT49
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All DBs
Position
complement(1052891..1053700)
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AA seq
269 aa
AA seq
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MAQRTFWKGYLKLSLVTCPVAMMPATTESAKIRFHTINRATGNRIMSRYVDSVTHKVVDD
DEQVKGYETGEGEYVMLEEDEIASVALESTRTIDIEQFVPRDSIEWLWYDKPHYLVPDDP
VGEEAFSVIRSAMESTQTVGIARLVLYRRERAVMLVPRDQGITLWTLRYGDEVRDPDDYF
DAIKPEKPEAKLLSLALSLIKERTERWDQKMVSDPVQDNLRKIIAARKKGARKTPKAKAA
EPVEQAGNVVNIMDALKRSIAAEQKGKGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcgcaccttctggaagggctatctgaagctctccctcgtcacctgtccggtg
gcgatgatgccggccacgacggaatcggcaaagatccgcttccacaccatcaatcgcgcc
accggcaatcgcatcatgagccgttatgtcgacagcgtgacgcacaaggtggtggacgat
gacgagcaggtgaagggctatgaaacgggcgagggcgagtatgtgatgctggaggaggac
gagatcgcctccgtcgcgcttgaaagcacgcgcacgatcgacatcgagcagttcgtgccg
agggattcaattgaatggctctggtatgacaagccgcactatctggtgccggacgacccg
gtgggggaggaagccttttcggtcatccgctccgcgatggaatcgacgcaaacggtgggc
atcgcccggctggtgctgtaccggcgcgagcgggcggtgatgctggttccgcgcgaccag
ggcatcaccttgtggacgcttcgctatggcgacgaggtgcgcgacccggatgactatttc
gacgcgataaagcccgaaaagcccgaggccaagctgctgtccctggccctgtcgctgatc
aaggaacggacggagcgctgggaccagaaaatggtgagcgacccggtgcaggacaatctg
cgcaagattatcgccgcccggaaaaagggggcccgcaagacgccgaaggccaaggcggcg
gagccagtcgaacaggccggcaatgtcgtcaacatcatggacgcgctgaagcgcagcatc
gcggcggaacagaagggcaagggccgctag
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