KEGG   Tardibacter chloracetimidivorans: BSL82_06185
Entry
BSL82_06185       CDS       T04967                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
sphj  Tardibacter chloracetimidivorans
Pathway
sphj02024  Quorum sensing
sphj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sphj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSL82_06185
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BSL82_06185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphj03019]
    BSL82_06185
   03036 Chromosome and associated proteins [BR:sphj03036]
    BSL82_06185
Messenger RNA biogenesis [BR:sphj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BSL82_06185
Chromosome and associated proteins [BR:sphj03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BSL82_06185
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: API58950
UniProt: A0A1L3ZTN0
LinkDB
Position
complement(1192037..1192282)
AA seq 81 aa
MADKSNNLQDIFLNTLRKTKTPVTMFLVNGVKLQGVITWFDNFSVLLRRDGHSQLVYKHA
ISTVMPASPINLAEIDSKADD
NT seq 246 nt   +upstreamnt  +downstreamnt
atggccgacaagtccaacaaccttcaggacatttttctcaacactctccgcaagacgaag
acgccggtgaccatgttcctggtcaatggagtgaagctccagggcgtgatcacctggttc
gacaacttctcggtgctgctccgccgcgatggacattcgcagcttgtctacaagcatgcg
atctccaccgtaatgccggcaagcccgatcaaccttgcggagatcgacagcaaggctgac
gattga

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