Tardibacter chloracetimidivorans: BSL82_06820
Help
Entry
BSL82_06820 CDS
T04967
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sphj
Tardibacter chloracetimidivorans
Pathway
sphj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSL82_06820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphj03019
]
BSL82_06820
03016 Transfer RNA biogenesis [BR:
sphj03016
]
BSL82_06820
Enzymes [BR:
sphj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BSL82_06820
Messenger RNA biogenesis [BR:
sphj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSL82_06820
Transfer RNA biogenesis [BR:
sphj03016
]
Prokaryotic type
tRNA degradation factors
BSL82_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
BPL_C
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
API60998
UniProt:
A0A1L3ZZE4
LinkDB
All DBs
Position
complement(1311446..1313788)
Genome browser
AA seq
780 aa
AA seq
DB search
MFDIQSQEVMWGGRKLTLETGRIARQADGAVIATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLVSRLIDRPVRPLFPEGFYNEINVIAQVLSY
DGECEPDMVAMVAASAALTLSGVPFMGPIAAARVGYVDGDYVLNPTNDQVKEGDLDLVVA
GTHDAVMMVESEANELSEEVMLGAVMFAHRECQPVIDAIIKLAEKAAKEPWEMAPQADLS
AAKKKLEKLIGKDIAAAYKLTNKSARSDALNAARAKAKEAFASESPQDQMAAMKLVKKLE
AEIVRTAILKDGRRIDGRNTTQIRPIDAVVQFLPRTHGSAVFTRGETQAICTTTLGTKDA
EQMIDGLNGLSYERFLLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALRPVLPTAEEF
PYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKDYAVISDI
LGDEDHLGDMDFKVAGTEVGITSLQMDIKIAGITEEIMKVALAQANEGRAHILGEMSKAL
AGTRQEMSAHAPRIETMQIPKDKIREVIGTGGKVIREIVATTGAKVDIDDEGLIKISSSD
LTQIEAARNWIHGIVAEPEVGAVYTGKVVSMVDFGAFVNFMGARDGLVHISEIKNERVAK
VSEVLTEGQEVKVKVLGIDDRGKVRLSMRLVDQETGEELPDTRPPREEREPRGDRGDRGD
RGGRGGSGGGGRDGDRRRDRGDRDRGPRRERSERGSREEGGKDEGPDPEFAPAFLTGDKD
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatacaaagccaggaagtgatgtggggcggcaggaagctgaccctggagacg
ggccgcattgcccgtcaggccgacggtgcggttatcgccacctatggtgaaaccgtggtg
ctttgcgccgtaaccgccgccaagagcgtgaaggaagggcaggatttcttcccccttacc
gttcattatcaggaaaaatattcggccgccgggcgcattccgggcggctttttcaagcgc
gaacgtggcgcgaccgaaaaggaaacgctggtttcgcggctgatcgaccggccggtgcgt
ccgctgtttccggaaggtttctacaacgagatcaacgtcatcgcccaggtgctgagctat
gacggcgaatgcgagcccgacatggtggcgatggtggcggcttccgccgctctcaccctg
tccggcgtgcccttcatggggccgatcgcagcggcgcgggtcggctatgtcgacggcgat
tatgtgctgaacccgaccaacgaccaggtgaaggaaggcgatctcgatctggtcgtcgcc
ggcacgcacgacgccgtgatgatggtcgaatccgaagccaatgagctgtcggaagaggtg
atgctgggcgccgtgatgttcgcccatcgcgaatgccagccggtgatcgacgcgatcatc
aagcttgccgaaaaggccgccaaggagccgtgggaaatggctccccaggccgatctgtcg
gccgccaagaagaagcttgagaagctgatcggcaaggacatcgccgccgcctacaagctg
accaacaagtcggcgcggtccgatgcactgaacgcggcgcgcgccaaggccaaggaggcg
ttcgcctctgaaagcccgcaggaccagatggccgcaatgaagctggtcaagaagctggaa
gccgaaatcgtccgcaccgccattctgaaggacggcaggcggatcgacgggcgcaacacc
acgcagatccgtccgatcgacgcggtggtgcagttcctgccccgcacgcatggctcggcc
gtgttcacgcgcggcgagacgcaggcgatctgcaccaccacgcttggcacgaaggacgcc
gagcagatgatcgacggccttaacggcctatcatatgagcgcttcctgctgcactacaac
ttcccgccctattcggtgggcgaggtcggccgcttcggcgcgccgggccgccgcgaagtg
ggccatggcaagcttgcgtggcgcgcgctgcgcccggtgctgccgacggcagaggagttc
ccctacacgatccgcgtgctgtcggacatcaccgagtccaacggctcctcgtccatggcg
acggtgtgcggcggctcgctgtcgatgatggacgcgggcgttccgctgaagcgtccggtg
tcgggcatcgccatgggccttatccttgaaggcaaggactatgccgtcatctccgacatc
cttggcgacgaggatcacctcggcgacatggacttcaaggttgcaggcaccgaggtgggc
atcacctcgctccagatggacatcaagatcgccggtatcaccgaagagatcatgaaggtc
gccctggcgcaggcgaacgagggccgcgcacacatcctcggcgagatgagcaaggcgctt
gcgggcacccgtcaggaaatgtcggcgcatgcgccgcgcatcgagacgatgcagatcccc
aaggacaagatccgcgaagtgatcggcaccggaggcaaggtgatccgcgagatcgtcgcc
accacaggcgcgaaagtggatatcgacgacgaaggcctgatcaagatctcgtcgtccgac
ctgacgcagatcgaagccgcccgtaactggattcacggcatcgtcgccgagccggaagtg
ggcgcggtctacacgggcaaggtcgtgtcgatggtcgatttcggcgcattcgtgaacttc
atgggtgcgcgtgacggcctcgtccacatctccgaaatcaagaacgagcgcgtcgccaag
gtttccgaagtcctcaccgaagggcaggaagtaaaggtgaaggtgcttggcatcgacgat
cgcggcaaggtgcgcctgtcgatgcgcctcgtcgatcaggagacgggcgaggaactgccc
gacacccgcccgccgcgcgaggagcgcgaaccgcgcggggatcgcggcgacaggggtgat
cgcggcggccgtggcggtagcggtggcgggggacgtgacggcgatcgtcgtcgcgaccgt
ggcgaccgtgatcgtggcccgcgccgcgagcgtagcgagcgcggcagccgtgaggaaggc
ggcaaggacgaaggccccgatccggagttcgcgccggcgttcctgacgggcgacaaggac
tga
DBGET
integrated database retrieval system
