Tardibacter chloracetimidivorans: BSL82_09025
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Entry
BSL82_09025 CDS
T04967
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sphj
Tardibacter chloracetimidivorans
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphj03016
]
BSL82_09025
Enzymes [BR:
sphj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BSL82_09025
Transfer RNA biogenesis [BR:
sphj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BSL82_09025
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
API59436
UniProt:
A0A1L3ZUV5
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All DBs
Position
1741690..1742307
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AA seq
205 aa
AA seq
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MTVYFHEEDLPGDVLAPGPVAVDTETMGLVTPRDRLCLVQIADGNGDEHLVRFSPGSDFA
APNLRAVLADPARLKIYHFARFDLAAIKAYLGVVAAPVYCTKIASRLVRTYTDRHGLKDL
VRELVGAEISKQQQSSDWGAPQLSEAQQDYAASDVRYLHRLREKLDERLAREHRAGLAQA
CFDFLPARAELDLAGWPEADIFAHI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatatttccatgaagaagacctgcccggggacgtgcttgctcccgggccggtc
gccgtcgataccgagaccatgggcctcgtcacgccccgcgacaggctgtgcctggtccag
atcgcggatggcaatggcgacgagcatctcgtccgattttcacccggaagcgatttcgcc
gcgcccaatctgcgcgcggtgctggccgacccggcccggctcaagatctatcatttcgcg
cgcttcgatctggccgcgatcaaggcctatctcggcgtcgtggccgcgcccgtctattgc
accaagatcgcctcgcggctggtgcgaacctacacggaccgccacggcctgaaggatctg
gtgcgcgaactggtgggcgcggagatttccaagcagcagcaatcgtccgactggggcgcg
ccgcaattgtcggaagcgcaacaggattatgcggcgtcggacgtccgctatcttcaccgc
ctcagggaaaagctggacgaaaggctcgcccgcgagcatcgcgccggactggcccaggca
tgttttgatttccttcccgcccgcgccgagctggacctcgccggctggcccgaagccgat
atcttcgcgcacatctga
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