Tardibacter chloracetimidivorans: BSL82_16860
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Entry
BSL82_16860 CDS
T04967
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sphj
Tardibacter chloracetimidivorans
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphj03400
]
BSL82_16860
Enzymes [BR:
sphj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSL82_16860
DNA repair and recombination proteins [BR:
sphj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BSL82_16860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DUF2800
DEAD
Motif
Other DBs
NCBI-ProteinID:
API60742
UniProt:
A0A1L3ZYN8
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All DBs
Position
3244935..3248369
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AA seq
1144 aa
AA seq
DB search
MADARKSYPLLDNQAVAADPRKHAWVSASAGTGKTQVLTARVLRLLLNGADPAGILCITF
TKAGAAEMAERLNGVLARWVRCPDKELRQHLFNLGEPNDDQMIARARTLFARVLEAAGGL
RIETIHAFAQSLLAAFPMESGVAPGFAALDERSTEVLKRRVLAEVLVEAERTGDPILDDF
RAISVRMGDGGKLMQMLGRMTNHAAALQAFRSREEITPRLRRFLDVPEDVDGAMAAACAD
SSFPVEIVRRIAAANAAWATKTGLTHADVIAAWLAASPADRARLLPDLLSVACTKDGKLR
AVQKGQRGTEPEYASLCERLHDSCSAILDLRARADLAEWLGVTLRAGWQVAQGYAAEKER
QGVIDYGDMIERAAALLSGDGMGAWVRYKLDQKLDHILIDEAQDTNRAQWTIASRLTEEF
FAGEGARGLRRTVFAVGDFKQAIFSFQGTDPREFDQARQWFDGQVRQSGGRLHDLDLAQS
FRSTGAVLDVVNRLIADLGPEAFGLDRGIPLHQTSRTGEAGQVILLPPTREALPDEDDQE
DAPEGEEEWVGGHERLHAQKLARQIAEWVDPVNPFRLEAKGRPLKAEDILVLVRSRGDFT
ALLVARLHEEGVAVAGVDRLRLTAPLAVQDMLALIRFALQPGDDLTLATLLVSPLIGLSQ
DQLLTLAHDRRGGLWRRLRQAAETDPAMKAAADWLLAVLAMADFAAPYEFLETVLSGPLD
GRRWLLRRLGEEARDPLDELLNAALAFEAANLPSLQGFLDWVEREDVEVKRDPSAPRDAV
RIMTVHGSKGLQAPLVVLADATKDPDRNAADHAMVAMANGALPLPLHCSPKEARGPVAEA
FADAAERARQEHWRLAYVAMTRAEDVLVVSGSLGPRARGQVPDASWYAAAARAMEGLEAD
GVPHPGWGEMRVYRTGKGRAAARKPRAPLPLPVLPEWVHASPPPEQAPPRPLAPSSLGED
SVTDPPLPPAAADAARRGSLLHGLFERLPAAPPARRRDLAEQWLSRPGREPDSARRAVLV
DAAMRVIDDPAFADIFAPDALAEAPVAAVVGETVVAGTVDRLLVTDGHVRVIDFKTGSRV
PAGLAEVPVYHLRQMAAYVAALETVFPGRLVEAALLYTSGPRLIRLEEDVLSPHRPMPRA
AISG
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcgcgcaagagctatccgctgctcgacaatcaggcggtcgcggccgatccg
cgcaagcacgcctgggtgtccgcctcggctggcaccggcaagacacaggtgctcactgcc
cgtgtgctccggctgctgctgaacggggcggacccggcgggcatcctctgcatcaccttc
accaaggcgggggcggccgaaatggccgagcggctgaacggcgtcctcgcgcgctgggtg
cgctgcccggacaaggaactgcgccagcacctgttcaaccttggcgagcccaatgacgac
cagatgatcgcccgcgcgcgcaccttgttcgcccgtgtgctggaagcggcggggggcctc
aggatcgagacgatccacgccttcgcccagtcgctgctcgccgcctttccgatggaaagc
ggggttgcgccgggctttgccgcgctggacgaacgatcgaccgaggtgctgaagcgccgg
gtgctggccgaggtgctggtggaggcggaacgcaccggcgatccgattctggatgatttc
cgggcgatcagcgtccgcatgggggacggcggcaagctgatgcagatgctggggcgcatg
acgaaccatgctgccgcgctgcaggccttccgctcgcgcgaggagatcaccccccggctc
aggcgcttccttgacgtgcccgaggatgtcgacggcgcgatggcggcagcctgcgcggac
agcagcttcccggttgagatcgtccgccggatcgcggccgccaatgccgcctgggccacg
aaaacgggccttacccatgccgatgtgatcgccgcctggcttgccgcctctccggcggat
cgcgcgcggctcctgccggatcttctttcggtcgcctgtacgaaggacgggaagctgcgg
gccgttcagaaggggcagagggggaccgaaccggaatatgcgtcgctgtgcgagcggctg
cacgacagctgctcggcaatactcgatcttcgcgctcgcgcagatctggccgaatggctt
ggggtgacgcttcgcgcgggctggcaggtggcgcagggctatgccgccgagaaggagcgt
cagggcgtcatcgattatggcgacatgatcgaacgcgccgccgccctgctttccggcgac
ggcatgggcgcatgggtgcgctacaagctggaccagaagctggatcatatcctgatcgac
gaggcgcaggacaccaaccgcgcgcaatggaccattgcgtcccggctgacggaggagttc
ttcgcgggcgagggcgcgcgcgggctgcggcgcacggtcttcgcggtcggcgatttcaag
caggcgatcttcagctttcagggcaccgatccgcgcgagttcgatcaggcgcggcaatgg
ttcgacggtcaggtccgccagtcgggcgggcgcttgcacgatctggaccttgcccagtcc
ttccgctcgacgggcgcggtgctggatgtcgtcaaccggctgatcgccgatctcggcccc
gaggcgttcgggctggaccggggcattccgcttcaccagaccagcaggacgggtgaggcg
gggcaggtcattctgctgccgccgacgcgcgaggcgctgccggacgaagacgatcaggaa
gacgcgcccgaaggcgaggaggaatgggtcggcggccatgaacggctgcatgcgcaaaag
ctcgcccgacagatcgcggaatgggtcgatcccgtaaatcccttccggctggaggcgaag
ggccggccgttgaaggccgaggacatattggtgctggtccgctcgcgcggcgatttcacc
gccctgcttgtcgcccggctgcatgaggaaggcgttgcagtcgcgggcgtggaccggctg
cggctcacggccccgctcgccgtgcaggacatgcttgcgcttatccgcttcgcgcttcag
ccgggcgacgatctgacgcttgcgacattgctggtgtcgccgctgatcgggctctcgcag
gatcagcttctgacgctggcccatgatcgccggggcggcctgtggcggcgcttgcggcag
gctgccgagaccgatcccgcgatgaaggcggcggccgactggctgctcgcggtgcttgcg
atggcggatttcgccgctccctacgaatttcttgaaacggtgctgtccggcccgctcgac
gggcgaaggtggctgctccggcggctgggcgaggaagcgcgcgacccgctggatgagttg
ctgaatgcagcgctcgcgttcgaggcggcgaacctcccttcgctccagggctttctcgac
tgggtggagcgggaagacgtggaggtgaagcgcgatccgtccgctccgcgcgacgcggtc
aggatcatgacggtgcatggctccaagggattgcaagcgccgcttgtcgtccttgccgat
gcgaccaaggaccctgaccgcaacgccgccgatcacgcgatggtggcgatggcgaacgga
gccttgcccttgcccctgcattgctcccccaaggaggcgcgcgggccggttgctgaggcc
tttgccgatgcggccgaacgcgcccggcaggaacattggcggctggcctatgtcgcaatg
acccgcgccgaggatgtgttggtcgtctccggttcgcttggccccagggccagggggcag
gttccggacgcaagctggtatgccgccgccgcgcgggcgatggaggggctggaggcggat
ggggttccgcatcccggctggggcgagatgcgcgtctatcggacgggcaagggccgcgcc
gccgcgcgaaagccgcgcgcgccgctgccgcttccggtccttccggaatgggtccacgcc
tcgcccccgccagagcaggcaccgccgcgcccgcttgcgccctcgtcgcttggcgaggac
agcgtcaccgatccgccgctcccgccggccgctgctgatgcggcgcgccggggctcgctg
cttcacggattgttcgagcggctgcccgccgccccgcccgcccgccgccgcgatcttgcc
gaacaatggctgtcgcggccggggcgtgaacccgattcagcgcgccgcgccgtgctggtc
gacgctgcgatgcgggtgatcgacgatcccgcattcgccgacattttcgctccggacgcg
ctcgccgaagcgccggtcgccgcggttgtcggggaaacggtggtggcgggtacggtggac
cggctgctggtcacggacggccatgtgcgggtgatcgatttcaagacgggcagccgcgtt
cccgccgggctggcagaggtgccggtctatcatctccggcagatggccgcctatgtcgcc
gcgctggaaacggtctttcccggccgtttggtggaggccgcgctgctctatacctcgggg
ccacggctgatccggctggaagaggacgtgctttcgccgcaccggcccatgccaagagcg
gctatcagcggctga
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