KEGG   Sphingopyxis fribergensis: SKP52_00245
Entry
SKP52_00245       CDS       T03542                                 
Name
(GenBank) HhH-GPD
  KO
K03575  A/G-specific adenine glycosylase [EC:3.2.2.31]
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SKP52_00245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphk03400]
    SKP52_00245
Enzymes [BR:sphk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.31  adenine glycosylase
     SKP52_00245
DNA repair and recombination proteins [BR:sphk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SKP52_00245
 Prokaryotic type
     SKP52_00245
SSDB
Motif
Pfam: HhH-GPD NUDIX_4 HHH EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: AJA07000
UniProt: A0A0A7PAJ1
LinkDB
Position
47998..49035
AA seq 345 aa
MSVQTSDIVGDFAGRLLDWYDQSARVLPWRIAPNSGGDPDPYRVWLAEVMLQQTTVAAVA
GYFARFTERWPTVADLAAAGDADVMAAWAGLGYYARARNLLACARVVMRDHGGRFPDSEA
GLRALPGIGDYTAASVAAIAFGRAAVVIDANVERVIARHRLIETPLPMAKREIRAALALL
VPGDRPGDFAQALMDLGATVCTPRGPACAICPLMADCRARGRADIERLPVKPPKKAKPHR
HGLAHWIEQDGQLWLVRRPDKGMLGGMRALPGGEWGEVPSESGIVSVDHGFTHFDLTLTL
VRRAAPHEGPDAAAEGLWWPIADLDAAGLPTLYRKLTDKMLERDA
NT seq 1038 nt   +upstreamnt  +downstreamnt
gtgagcgtccagacttccgacatcgttggcgacttcgcggggcggctgctcgactggtac
gaccagtcggcgcgggtgctgccgtggcggatcgcgccgaacagtggcggcgaccccgat
ccctatcgcgtctggctggccgaggtcatgttgcagcagacgaccgtcgctgcggtcgcg
ggctatttcgcgcgctttaccgagcgttggccgacggttgccgatctggcggcggcgggc
gatgccgatgtcatggcggcgtgggcggggcttggctattatgcccgcgcgcgcaatctg
ctcgcctgcgcgcgcgtggttatgcgcgaccatggtgggcgctttcccgatagcgaagcg
gggctgcgcgcgctgcccgggatcggcgattataccgcggcgtcggtcgcggcgattgcc
tttggccgcgcggcggtggtcattgacgcgaatgtcgagcgcgtgatcgcgcgccaccgg
ctgatcgagacaccgctgccgatggcgaagcgcgagattcgtgccgctttggcgctgctg
gtgccgggcgatcgaccgggcgatttcgctcaggcgctgatggaccttggtgcgacggtc
tgcacgccgcgtggaccggcgtgcgcaatctgtccgttgatggcggactgccgcgcgcgc
ggccgggcggatatcgagcgcttgccggtcaagccgccgaagaaggcgaagccgcatcgc
cacgggcttgcgcactggatcgagcaggacgggcagctgtggctcgtccgtcgccccgac
aagggcatgctcggcgggatgcgtgcgctgcccggcggcgaatggggcgaggtgccatcc
gagtcgggaattgtcagcgtcgatcatggttttacccatttcgacctgacgctgaccttg
gttcggcgcgcggctccccacgaaggccccgatgccgcagcggaaggcctatggtggccg
atcgcagaccttgacgcggcggggctgccgacgctctatcgcaaactgaccgacaagatg
ctggagagagacgcatga

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